RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 CTSAP10619 480 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 CLCNKBP51801 687 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 YARSP54577 528 aaKnown RBP15.16■□□□□ 0.02
TPM1-230ENST00000561266 STK4Q13043 487 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 HSP90AA2PQ14568 343 aaPredicted RBP15.16■□□□□ 0.02
TPM1-230ENST00000561266 ZBTB6Q15916 424 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 DUSP6Q16828 381 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 APBB1IPQ7Z5R6 666 aaPredicted RBP15.16■□□□□ 0.02
TPM1-230ENST00000561266 KIAA0895Q8NCT3 520 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 ZNF507Q8TCN5 953 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 SCFD1Q8WVM8 642 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 PABPC5Q96DU9 382 aaKnown RBP15.16■□□□□ 0.02
TPM1-230ENST00000561266 SAAL1Q96ER3 474 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 PCIF1Q9H4Z3 704 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 TLE6Q9H808 572 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 CLDND1Q9NY35 253 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 CHMP5Q9NZZ3 219 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 CLEC1BQ9P126 229 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 THEGQ9P2T0 379 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 TUBGCP4Q9UGJ1 667 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 AGO2Q9UKV8 859 aaKnown RBP15.16■□□□□ 0.02
TPM1-230ENST00000561266 PCDHB13Q9Y5F0 798 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 GOLGA8IPA6NC78 632 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 GOLGA8JA6NMD2 632 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 I3L4J1 428 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 CLASP2O75122 1294 aaKnown RBP15.15■□□□□ 0.02
TPM1-230ENST00000561266 SOD2P04179 222 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 SCP2P22307 547 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 KCNA5P22460 613 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 DPYDQ12882 1025 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 PTPN14Q15678 1187 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 UPP1Q16831 310 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 KIAA0319Q5VV43 1072 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 FUT10Q6P4F1 479 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 EP400NLQ6ZTU2 488 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 NELFCDQ8IXH7 590 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 EFHBQ8N7U6 833 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.15■□□□□ 0.02
TPM1-230ENST00000561266 POMGNT1Q8WZA1 660 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 ERCC4Q92889 916 aaPredicted RBP15.15■□□□□ 0.02
TPM1-230ENST00000561266 HERC2P3Q9BVR0 1158 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 COLEC11Q9BWP8 271 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 USP25Q9UHP3 1055 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 ADAM28Q9UKQ2 775 aa15.15■□□□□ 0.02
TPM1-230ENST00000561266 BARX2Q9UMQ3 279 aaPredicted RBP15.15■□□□□ 0.02
TPM1-230ENST00000561266 C2CD2LO14523 706 aa15.14■□□□□ 0.01
TPM1-230ENST00000561266 PPEF2O14830 753 aa15.14■□□□□ 0.01
TPM1-230ENST00000561266 BMP1P13497 986 aa15.14■□□□□ 0.01
TPM1-230ENST00000561266 BRCC3P46736 316 aa15.14■□□□□ 0.01
TPM1-230ENST00000561266 SMC1AQ14683 1233 aaKnown RBP15.14■□□□□ 0.01
TPM1-230ENST00000561266 CLUL1Q15846 466 aa15.14■□□□□ 0.01
TPM1-230ENST00000561266 RTP2Q5QGT7 225 aa15.14■□□□□ 0.01
TPM1-230ENST00000561266 JADE1Q6IE81 842 aa15.14■□□□□ 0.01
TPM1-230ENST00000561266 LLGL2Q6P1M3 1020 aa15.14■□□□□ 0.01
TPM1-230ENST00000561266 FAM212AQ96EL1 285 aa15.14■□□□□ 0.01
TPM1-230ENST00000561266 ASB2Q96Q27 587 aa15.14■□□□□ 0.01
TPM1-230ENST00000561266 PYM1Q9BRP8 204 aaKnown RBP15.14■□□□□ 0.01
TPM1-230ENST00000561266 RPF1Q9H9Y2 349 aaKnown RBP15.14■□□□□ 0.01
TPM1-230ENST00000561266 NGRNQ9NPE2 291 aaKnown RBP15.14■□□□□ 0.01
TPM1-230ENST00000561266 TOPORSQ9NS56 1045 aaPredicted RBP15.14■□□□□ 0.01
TPM1-230ENST00000561266 CHST7Q9NS84 486 aa15.14■□□□□ 0.01
TPM1-230ENST00000561266 COG5Q9UP83 839 aa15.14■□□□□ 0.01
TPM1-230ENST00000561266 MTCL1Q9Y4B5 1905 aaKnown RBP15.13■□□□□ 0.01
TPM1-230ENST00000561266 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.13■□□□□ 0.01
TPM1-230ENST00000561266 EIF3DO15371 548 aaKnown RBP eCLIP15.13■□□□□ 0.01
TPM1-230ENST00000561266 NR1I2O75469 434 aa15.13■□□□□ 0.01
TPM1-230ENST00000561266 TADA2AO75478 443 aa15.13■□□□□ 0.01
TPM1-230ENST00000561266 RPN1P04843 607 aaKnown RBP15.13■□□□□ 0.01
TPM1-230ENST00000561266 NFICP08651 508 aa15.13■□□□□ 0.01
TPM1-230ENST00000561266 CNPP09543 421 aaKnown RBP15.13■□□□□ 0.01
TPM1-230ENST00000561266 SLFN12LQ6IEE8 588 aa15.13■□□□□ 0.01
TPM1-230ENST00000561266 PDE12Q6L8Q7 609 aaKnown RBP15.13■□□□□ 0.01
TPM1-230ENST00000561266 KANK3Q6NY19 840 aa15.13■□□□□ 0.01
TPM1-230ENST00000561266 PRSS55Q6UWB4 352 aaPredicted RBP15.13■□□□□ 0.01
TPM1-230ENST00000561266 EFCAB13Q8IY85 973 aa15.13■□□□□ 0.01
TPM1-230ENST00000561266 SYCP3Q8IZU3 236 aa15.13■□□□□ 0.01
TPM1-230ENST00000561266 SLC22A17Q8WUG5 538 aa15.13■□□□□ 0.01
TPM1-230ENST00000561266 KIF12Q96FN5 646 aa15.13■□□□□ 0.01
TPM1-230ENST00000561266 DOCK6Q96HP0 2047 aa15.13■□□□□ 0.01
TPM1-230ENST00000561266 MSLNLQ96KJ4 702 aa15.13■□□□□ 0.01
TPM1-230ENST00000561266 KLHL5Q96PQ7 755 aa15.13■□□□□ 0.01
TPM1-230ENST00000561266 FAM213AQ9BRX8 229 aa15.13■□□□□ 0.01
TPM1-230ENST00000561266 PLEKHA5Q9HAU0 1116 aa15.13■□□□□ 0.01
TPM1-230ENST00000561266 CDH22Q9UJ99 828 aa15.13■□□□□ 0.01
TPM1-230ENST00000561266 IRAK3Q9Y616 596 aa15.13■□□□□ 0.01
TPM1-230ENST00000561266 PODXLO00592 558 aa15.12■□□□□ 0.01
TPM1-230ENST00000561266 CLIC2O15247 247 aa15.12■□□□□ 0.01
TPM1-230ENST00000561266 EPCAMP16422 314 aa15.12■□□□□ 0.01
TPM1-230ENST00000561266 RPL17P18621 184 aaKnown RBP15.12■□□□□ 0.01
TPM1-230ENST00000561266 GARTP22102 1010 aa15.12■□□□□ 0.01
TPM1-230ENST00000561266 ABCD1P33897 745 aa15.12■□□□□ 0.01
TPM1-230ENST00000561266 CA8P35219 290 aa15.12■□□□□ 0.01
TPM1-230ENST00000561266 MRPS5P82675 430 aaKnown RBP15.12■□□□□ 0.01
TPM1-230ENST00000561266 DSG1Q02413 1049 aa15.12■□□□□ 0.01
TPM1-230ENST00000561266 PNOCQ13519 176 aa15.12■□□□□ 0.01
TPM1-230ENST00000561266 ALCAMQ13740 583 aa15.12■□□□□ 0.01
TPM1-230ENST00000561266 BMT2Q1RMZ1 405 aa15.12■□□□□ 0.01
TPM1-230ENST00000561266 LEXMQ3ZCV2 418 aa15.12■□□□□ 0.01
TPM1-230ENST00000561266 DCLRE1AQ6PJP8 1040 aa15.12■□□□□ 0.01
TPM1-230ENST00000561266 ATXN2LQ8WWM7 1075 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms