RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 FCER1AP12319 257 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 S100A5P33763 92 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 METTL16Q86W50 562 aaKnown RBP13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 EME1Q96AY2 570 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 FAM129AQ9BZQ8 928 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 SIK2Q9H0K1 926 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 ACAD9Q9H845 621 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 PP2D1A8MPX8 630 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 CYP26A1O43174 497 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 CCDC159P0C7I6 412 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 GALCP54803 685 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 SESN2P58004 480 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 GPSM2P81274 684 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 PIGHQ14442 188 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 DMC1Q14565 340 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 RBBP7Q16576 425 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 THEMIS2Q5TEJ8 643 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 ADGRF4Q8IZF3 695 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 PSD3Q9NYI0 1048 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 METP08581 1390 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 ZFYVE16Q7Z3T8 1539 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 DPYSL4O14531 572 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 HIST1H2AGP0C0S8 130 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 HIST1H2ADP20671 130 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 CARSP49589 748 aaKnown RBP13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 ALDH18A1P54886 795 aaKnown RBP13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 CDC42EP1Q00587 391 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 MTFR1Q15390 333 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 EDRF1Q3B7T1 1238 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 AFG1LQ8WV93 481 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 ARHGEF26Q96DR7 871 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 HIST1H2AHQ96KK5 128 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 HIST1H2AJQ99878 128 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 C7orf25Q9BPX7 421 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 SENP7Q9BQF6 1050 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 H2AFJQ9BTM1 129 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 FRMD8Q9BZ67 464 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 ASCC2Q9H1I8 757 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 ADNPQ9H2P0 1102 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 UNC45AQ9H3U1 944 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 KCND2Q9NZV8 630 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 ATP11BQ9Y2G3 1177 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 HSPA1AP0DMV8 641 aaKnown RBP13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 HSPA1BP0DMV9 641 aaKnown RBP13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 ADORA2BP29275 332 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 MTF1Q14872 753 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 E4F1Q66K89 784 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 SLC30A9Q6PML9 568 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 ANKS3Q6ZW76 656 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 TRAPPC11Q7Z392 1133 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 KCTD17Q8N5Z5 321 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 POLIQ9UNA4 740 aa13.89□□□□□ -0.19
CSPG4P11-201ENST00000560634 PALLDQ8WX93 1383 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 RHOBTB3O94955 611 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 ATXN8OSP0DMR3 200 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 RANBP1P43487 201 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 MAP3K7CLP57077 242 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 TPI1P60174 286 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 MRPL28Q13084 256 aaKnown RBP13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 AASDHQ4L235 1098 aaPredicted RBP13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 C4orf22Q6V702 233 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 IL17RAQ96F46 866 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 NARFQ9UHQ1 456 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 HERC5Q9UII4 1024 aaKnown RBP13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 KCNN4O15554 427 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 DGAT1O75907 488 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 WDR47O94967 919 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 SPRP35270 261 aaPredicted RBP13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 ZNF200P98182 395 aaPredicted RBP13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 RUNX1T1Q06455 604 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 NAB2Q15742 525 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 TRPM8Q7Z2W7 1104 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 ADCK1Q86TW2 530 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 MFN1Q8IWA4 741 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 TBC1D19Q8N5T2 526 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 KIF12Q96FN5 646 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 PALMDQ9NP74 551 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 SRP68Q9UHB9 627 aaKnown RBP13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 ZDHHC9Q9Y397 364 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 NEU2Q9Y3R4 380 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 TBX3O15119 743 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 MOCS2O96007 188 aaPredicted RBP13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 FBXW4P57775 412 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 MRPS35P82673 323 aaKnown RBP13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 VEPH1Q14D04 833 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 ANO4Q32M45 955 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 C6orf10Q5SRN2 563 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 DAB2IPQ5VWQ8 1189 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 LONP2Q86WA8 852 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 SLC35G2Q8TBE7 412 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 SCFD2Q8WU76 684 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 PHF21AQ96BD5 680 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 TDRD3Q9H7E2 651 aaKnown RBP13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 OLFML3Q9NRN5 406 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 PAIP2BQ9ULR5 123 aaKnown RBP13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 ABCA8O94911 1581 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 MBD5Q9P267 1494 aa13.88□□□□□ -0.19
CSPG4P11-201ENST00000560634 APRTP07741 180 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms