RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 RESP18Q5W5W9 173 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 SLFN12LQ6IEE8 588 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 ELMSAN1Q6PJG2 1045 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 DCLRE1AQ6PJP8 1040 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 ALKAL1Q6UXT8 129 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 PALB2Q86YC2 1186 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 ADHFE1Q8IWW8 467 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 NOC3LQ8WTT2 800 aaKnown RBP14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 POMGNT1Q8WZA1 660 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 C18orf25Q96B23 403 aaPredicted RBP14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 HVCN1Q96D96 273 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 KIF12Q96FN5 646 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 DDX27Q96GQ7 796 aaKnown RBP14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 CHAMP1Q96JM3 812 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 ZMAT2Q96NC0 199 aaKnown RBP14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 ACCSQ96QU6 501 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 FIZ1Q96SL8 496 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 PYM1Q9BRP8 204 aaKnown RBP14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 TTPALQ9BTX7 342 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 HAPLN2Q9GZV7 340 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 ST6GALNAC4Q9H4F1 302 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 DZANK1Q9NVP4 752 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 CNTN3Q9P232 1028 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 PRKAG3Q9UGI9 489 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 ZDHHC9Q9Y397 364 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 NUB1Q9Y5A7 615 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 PCDHB13Q9Y5F0 798 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 A0A0B4J269 797 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 ANKRD63C9JTQ0 380 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 PODXLO00592 558 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 TEX28O15482 410 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 KCNE1P15382 129 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 RPL17P18621 184 aaKnown RBP14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 AFMP43652 599 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 CLCN4P51793 760 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 CREMQ03060 361 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 SOX4Q06945 474 aaPredicted RBP14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 CBX2Q14781 532 aaPredicted RBP14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 E2F4Q16254 413 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 UPP1Q16831 310 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 L1TD1Q5T7N2 865 aaKnown RBP14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 SYCE2Q6PIF2 218 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 PRSS55Q6UWB4 352 aaPredicted RBP14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 STXBP4Q6ZWJ1 553 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 RNF168Q8IYW5 571 aaPredicted RBP14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 C12orf76Q8N812 135 aaPredicted RBP14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 LEO1Q8WVC0 666 aaPredicted RBP14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 RPGRIP1Q96KN7 1286 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 FBXL18Q96ME1 805 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 TRIM9Q9C026 710 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 PLEKHA5Q9HAU0 1116 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 MAGEF1Q9HAY2 307 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 TSHZ2Q9NRE2 1034 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 OLFML3Q9NRN5 406 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 CHST7Q9NS84 486 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 KBTBD4Q9NVX7 518 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 DPP7Q9UHL4 492 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 KCNH3Q9ULD8 1083 aa14.13□□□□□ -0.15
CTDSPL2-209ENST00000560620 C5orf42Q9H799 3197 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 TISP43B9A030 160 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 XPOTO43592 962 aaKnown RBP14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 LILRB3O75022 631 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 GLUD1P00367 558 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 WEE2P0C1S8 567 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 SPATA31D3P0C874 917 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 SP100P23497 879 aaPredicted RBP14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 ACOT2P49753 483 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 ZP2Q05996 745 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 ITIH3Q06033 890 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 ALCAMQ13740 583 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 POSTNQ15063 836 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 PSMD5Q16401 504 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 XKR4Q5GH76 650 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 RTP2Q5QGT7 225 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 ZBTB41Q5SVQ8 909 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 KANK3Q6NY19 840 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 SLC39A4Q6P5W5 647 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 TMC5Q6UXY8 1006 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 SPATA31D4Q6ZUB0 917 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 SLC22A17Q8WUG5 538 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 KCNN1Q92952 543 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 SCAND2PQ9GZW5 306 aaPredicted RBP14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 BLZF1Q9H2G9 400 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 IKZF4Q9H2S9 585 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 CD320Q9NPF0 282 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 MAN1C1Q9NR34 630 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 AGO2Q9UKV8 859 aaKnown RBP14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 CUL9Q8IWT3 2517 aa14.12□□□□□ -0.15
CTDSPL2-209ENST00000560620 A0A1B0GVL5 298 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 LACTBL1A8MY62 500 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 TMEM189-UBE2V1I3L0A0 370 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 I3L4J1 428 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 EFEMP2O95967 443 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 RPL9P32969 192 aaKnown RBP14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 MCM4P33991 863 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 BRCC3P46736 316 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 CASP5P51878 434 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 KCNA1Q09470 495 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 ENOX2Q16206 610 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms