RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 FNBP1Q96RU3 617 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 CGRRF1Q99675 332 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 SPATC1LQ9H0A9 340 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 C2orf40Q9H1Z8 148 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 OSGEPQ9NPF4 335 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 GOLGA6AQ9NYA3 693 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 PPP1R1BQ9UD71 204 aaPredicted RBP10.42□□□□□ -0.74
RTF1-206ENST00000560447 PARP2Q9UGN5 583 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 AGO2Q9UKV8 859 aaKnown RBP10.42□□□□□ -0.74
RTF1-206ENST00000560447 SCAF8Q9UPN6 1271 aaKnown RBP10.42□□□□□ -0.74
RTF1-206ENST00000560447 KCNH4Q9UQ05 1017 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 CNTN6Q9UQ52 1028 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 UTP11Q9Y3A2 253 aaKnown RBP10.42□□□□□ -0.74
RTF1-206ENST00000560447 PCDHB2Q9Y5E7 798 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 A0A0B4J269 797 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 GSTTP1A0A1W2PQM5 241 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 SPDYE5A6NIY4 337 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 HMGB1P1B2RPK0 211 aaPredicted RBP10.41□□□□□ -0.74
RTF1-206ENST00000560447 ADCY3O60266 1144 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 PHF2O75151 1096 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 LGR5O75473 907 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 ERLIN2O94905 339 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 FGGP02679 453 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 C4BPAP04003 597 aaKnown RBP10.41□□□□□ -0.74
RTF1-206ENST00000560447 ATP4AP20648 1035 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 UBA1P22314 1058 aaKnown RBP10.41□□□□□ -0.74
RTF1-206ENST00000560447 GLRA2P23416 452 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 CTNNA1P35221 906 aaKnown RBP10.41□□□□□ -0.74
RTF1-206ENST00000560447 LMAN1P49257 510 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 ERVK-9P63128 1117 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 IRX3P78415 501 aaPredicted RBP10.41□□□□□ -0.74
RTF1-206ENST00000560447 SKOR1P84550 965 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 PTP4A2Q12974 167 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 PPIL2Q13356 520 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 MXD4Q14582 209 aaPredicted RBP10.41□□□□□ -0.74
RTF1-206ENST00000560447 CYP1B1Q16678 543 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 CLEC16AQ2KHT3 1053 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 CYFIP1Q7L576 1253 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 PLPPR4Q7Z2D5 763 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 SULF1Q8IWU6 871 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 GSPT2Q8IYD1 628 aaKnown RBP10.41□□□□□ -0.74
RTF1-206ENST00000560447 ANKRD13AQ8IZ07 590 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 C12orf50Q8NA57 414 aaPredicted RBP10.41□□□□□ -0.74
RTF1-206ENST00000560447 SHCBP1Q8NEM2 672 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 ZNF564Q8TBZ8 553 aaPredicted RBP10.41□□□□□ -0.74
RTF1-206ENST00000560447 TAS1R2Q8TE23 839 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 ZC3H15Q8WU90 426 aaKnown RBP10.41□□□□□ -0.74
RTF1-206ENST00000560447 DDX1Q92499 740 aaKnown RBP10.41□□□□□ -0.74
RTF1-206ENST00000560447 CD101Q93033 1021 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 CCDC127Q96BQ5 260 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 TAS2R14Q9NYV8 317 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 HCSTQ9UBK5 93 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 PCYOX1Q9UHG3 505 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 MTUS1Q9ULD2 1270 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 NFU1Q9UMS0 254 aa10.41□□□□□ -0.74
RTF1-206ENST00000560447 ADGRA2Q96PE1 1338 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 CYP26A1O43174 497 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 UNGP13051 313 aaPredicted RBP10.4□□□□□ -0.74
RTF1-206ENST00000560447 CAPN2P17655 700 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 MAN1A1P33908 653 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 USP8P40818 1118 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 FNTAP49354 379 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 PEX5P50542 639 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 DNA2P51530 1060 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 STAT5BP51692 787 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 EIF3BP55884 814 aaKnown RBP10.4□□□□□ -0.74
RTF1-206ENST00000560447 SP2Q02086 613 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 CENPCQ03188 943 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 R3HDM1Q15032 1099 aaKnown RBP10.4□□□□□ -0.74
RTF1-206ENST00000560447 CDCA2Q69YH5 1023 aaPredicted RBP10.4□□□□□ -0.74
RTF1-206ENST00000560447 RUFY4Q6ZNE9 571 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 FASTKD5Q7L8L6 764 aaKnown RBP10.4□□□□□ -0.74
RTF1-206ENST00000560447 PALB2Q86YC2 1186 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 BRSK2Q8IWQ3 736 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 ZBTB8OSQ8IWT0 167 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 KLHL7Q8IXQ5 586 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 ARFGAP2Q8N6H7 521 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 ZSWIM2Q8NEG5 633 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 IFT81Q8WYA0 676 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 ZNF653Q96CK0 615 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 ZIM3Q96PE6 472 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 PCDHB18PQ96TA0 734 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 FAM213AQ9BRX8 229 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 KIFC3Q9BVG8 833 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 MROH8Q9H579 483 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 AZI2Q9H6S1 392 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 BTBD7Q9P203 1132 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 COG5Q9UP83 839 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 AGTPBP1Q9UPW5 1226 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 PCDHA3Q9Y5H8 950 aa10.4□□□□□ -0.74
RTF1-206ENST00000560447 IGKV6-21A0A0C4DH24 114 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 SOWAHBA6NEL2 793 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 GOLGA6L10A6NI86 522 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 ASAP2O43150 1006 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 GRIN3BO60391 1043 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 HLA-DRAP01903 254 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 CYP1A1P04798 512 aaPredicted RBP10.39□□□□□ -0.75
RTF1-206ENST00000560447 MMEP08473 750 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 OSBPP22059 807 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 ECHS1P30084 290 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms