RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 KRT26Q7Z3Y9 468 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 CATIPQ7Z7H3 387 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 SULF2Q8IWU5 870 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 IFNL2Q8IZJ0 200 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 SYCE1Q8N0S2 351 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 GUF1Q8N442 669 aaKnown RBP6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 DAGLBQ8NCG7 672 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 PARD3BQ8TEW8 1205 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 UBLCP1Q8WVY7 318 aaPredicted RBP6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 BSNDQ8WZ55 320 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 ESR2Q92731 530 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 PLD4Q96BZ4 506 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 GRAMD1AQ96CP6 724 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 THOC1Q96FV9 657 aaKnown RBP6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 NAF1Q96HR8 494 aaKnown RBP6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 ZNF496Q96IT1 587 aaPredicted RBP6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 POP1Q99575 1024 aaKnown RBP6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 MYL10Q9BUA6 226 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 OSBPL1AQ9BXW6 950 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 LRRC27Q9C0I9 530 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 VCXQ9H320 206 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 RIC8AQ9NPQ8 531 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 DNAJB12Q9NXW2 375 aaKnown RBP6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 RGL1Q9NZL6 768 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 AIPL1Q9NZN9 384 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 KLF15Q9UIH9 416 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 HCN2Q9UL51 889 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 ATP6V0A2Q9Y487 856 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 USP15Q9Y4E8 981 aaPredicted RBP6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 ASB3Q9Y575 518 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 MROH7Q68CQ1 1323 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 C10orf71Q711Q0 1435 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 A0A1B0GUL6 1792 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 LAMB2P55268 1798 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 SETD1BQ9UPS6 1966 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 FRMD3A2A2Y4 597 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 LRRC53A6NM62 1247 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 GSG1L2A8MUP6 293 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 ENPP3O14638 875 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 HNRNPCL1O60812 293 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 DIAPH2O60879 1101 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 HIP1RO75146 1068 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 GFPT2O94808 682 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 GNA14O95837 355 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 CLTAP09496 248 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 ZBTB48P10074 688 aaPredicted RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 CCNB1P14635 433 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 CHN1P15882 459 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 HSPA6P17066 643 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 GNAZP19086 355 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 NME2P22392 152 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 TMOD1P28289 359 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 LTKP29376 864 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 CXCR5P32302 372 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 MSH2P43246 934 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 GIPRP48546 466 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 ALDH5A1P51649 535 aaPredicted RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 DHX34Q14147 1143 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 LRRC14Q15048 493 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 TAF11Q15544 211 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 DDR2Q16832 855 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 EARS2Q5JPH6 523 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 SFMBT2Q5VUG0 894 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 RNF43Q68DV7 783 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 ANKRD40Q6AI12 368 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 MFSD5Q6N075 450 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 IRGCQ6NXR0 463 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 REC114Q7Z4M0 266 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 SLFN11Q7Z7L1 901 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 TBC1D1Q86TI0 1168 aaPredicted RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 RBM12BQ8IXT5 1001 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 DHX37Q8IY37 1157 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 RPUSD2Q8IZ73 545 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 AGGF1Q8N302 714 aaeCLIP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 ARHGAP18Q8N392 663 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 ENDOVQ8N8Q3 282 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 ZCRB1Q8TBF4 217 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 GRIN3AQ8TCU5 1115 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 NEK9Q8TD19 979 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 TRPM4Q8TD43 1214 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 INPP5DQ92835 1189 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 LRRC59Q96AG4 307 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 SHISA4Q96DD7 197 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 MS4A14Q96JA4 679 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 RUNDC3BQ96NL0 473 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 TMEM237Q96Q45 408 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 NAP1L3Q99457 506 aaPredicted RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 FMO2Q99518 471 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 TSG101Q99816 390 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 KRTAP4-5Q9BYR2 181 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 ROPN1BQ9BZX4 212 aaPredicted RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 ECT2Q9H8V3 914 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 ROPN1Q9HAT0 212 aaPredicted RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 RXFP1Q9HBX9 757 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 PIH1D3Q9NQM4 214 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 INCENPQ9NQS7 918 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 PAPOLBQ9NRJ5 636 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 TXLNGQ9NUQ3 528 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 INTS9Q9NV88 658 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 EHD2Q9NZN4 543 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms