RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 ACOT2P49753 483 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 ADAM9Q13443 819 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 GPM6BQ13491 265 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 TMEM132DQ14C87 1099 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 ZBTB6Q15916 424 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 PDXDC1Q6P996 788 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 DCLRE1AQ6PJP8 1040 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 SASS6Q6UVJ0 657 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 LRRC55Q6ZSA7 311 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 INTS8Q75QN2 995 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 CEP63Q96MT8 703 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 FNBP1Q96RU3 617 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 KLK14Q9P0G3 267 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 PLXNA4Q9HCM2 1894 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 LACTBL1A8MY62 500 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 PTGESO14684 152 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 IKBKBO14920 756 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 SLC16A3O15427 465 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 STX10O60499 249 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 KRT13P13646 458 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 LRPAP1P30533 357 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 PNPLA4P41247 253 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 OR1G1P47890 313 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 GATMP50440 423 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 NLRP12P59046 1061 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 PAK1Q13153 545 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 PSMD6Q15008 389 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 DUOXA2Q1HG44 320 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 ZCWPW2Q504Y3 356 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 SPATA1Q5VX52 437 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 CRELD2Q6UXH1 353 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 DDX53Q86TM3 631 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 WDR49Q8IV35 697 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 SLC39A11Q8N1S5 342 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 TMC2Q8TDI7 906 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 ARNTL2Q8WYA1 636 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 KIF12Q96FN5 646 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 IGSF21Q96ID5 467 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 LRCH3Q96II8 777 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 MFSD14AQ96MC6 490 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 PCIF1Q9H4Z3 704 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 METTL14Q9HCE5 456 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 NGRNQ9NPE2 291 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 RWDD2AQ9UIY3 292 aa13.07□□□□□ -0.32
RABGGTA-215ENST00000560207 TISP43B9A030 160 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 NRP1O14786 923 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 CLIC2O15247 247 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 LPXNO60711 386 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 TADA2AO75478 443 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 FGF18O76093 207 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 DDHD2O94830 711 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 CAVIN2O95810 425 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 C1RP00736 705 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 TNNC2P02585 160 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 LINC00271P0C7V0 271 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 EPB41P11171 864 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 TNFSF9P41273 254 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 CYP2J2P51589 502 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 MCCD1P59942 119 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 CREMQ03060 361 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 NAB2Q15742 525 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 ZNF280BQ86YH2 543 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 DEFB123Q8N688 67 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 KLHL23Q8NBE8 558 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 FAM212AQ96EL1 285 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 SAAL1Q96ER3 474 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 ANKRD36BP1Q96IX9 119 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 C17orf80Q9BSJ5 609 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 OXCT2Q9BYC2 517 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 NAT10Q9H0A0 1025 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 ANO10Q9NW15 660 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 MIOSQ9NXC5 875 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 ADAM28Q9UKQ2 775 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 ITGA11Q9UKX5 1188 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 PLAGL2Q9UPG8 496 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 MAPK8IP1Q9UQF2 711 aa13.06□□□□□ -0.32
RABGGTA-215ENST00000560207 SF3B1O75533 1304 aaKnown RBP eCLIP13.06□□□□□ -0.328e-6■■■■■ 107
RABGGTA-215ENST00000560207 COL4A4P53420 1690 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 PPP1R3GB7ZBB8 358 aa13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 BIN1O00499 593 aa13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 NCK2O43639 380 aa13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 TMEM191BP0C7N4 346 aa13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 SLC11A1P49279 550 aa13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 CLDN10P78369 228 aa13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 CYP24A1Q07973 514 aa13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 UPP1Q16831 310 aa13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 TIGD5Q53EQ6 642 aa13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 ZC3H3Q8IXZ2 948 aaKnown RBP13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 NOC3LQ8WTT2 800 aaKnown RBP13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 NELFBQ8WX92 580 aa13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 ERCC4Q92889 916 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 MRPL38Q96DV4 380 aaKnown RBP13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 ZNF560Q96MR9 790 aa13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 TTYH1Q9H313 450 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 IRAK3Q9Y616 596 aa13.05□□□□□ -0.32
RABGGTA-215ENST00000560207 B3GAT3O94766 335 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 TNNI1P19237 187 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 GTF2H1P32780 548 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 USP41Q3LFD5 358 aa13.04□□□□□ -0.32
RABGGTA-215ENST00000560207 SEZ6Q53EL9 994 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms