RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CBX2Q14781 532 aaPredicted RBP14.43□□□□□ -0.1
SMAD3-213ENST00000560175 CLUL1Q15846 466 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 GLRA4Q5JXX5 417 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 LILRA6Q6PI73 481 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 PDILTQ8N807 584 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 IQUBQ8NA54 791 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 HDAC7Q8WUI4 952 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 PIK3R5Q8WYR1 880 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 RABGGTAQ92696 567 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 RHOBTB2Q9BYZ6 727 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 LRRC27Q9C0I9 530 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 ADAM7Q9H2U9 754 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 SLC38A7Q9NVC3 462 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 DZANK1Q9NVP4 752 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.43□□□□□ -0.1
SMAD3-213ENST00000560175 SF3B1O75533 1304 aaKnown RBP eCLIP14.42□□□□□ -0.12e-11■■■■■ 213.9
SMAD3-213ENST00000560175 LOC730098B7Z3J9 87 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 HNRNPDLO14979 420 aaKnown RBP14.42□□□□□ -0.1
SMAD3-213ENST00000560175 EPCAMP16422 314 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 FGFR3P22607 806 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 EHHADHQ08426 723 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 ALCAMQ13740 583 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 TPRNQ4KMQ1 711 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 SEZ6Q53EL9 994 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 RTP2Q5QGT7 225 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 ADALQ6DHV7 355 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 SLFN12LQ6IEE8 588 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 LLGL2Q6P1M3 1020 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 C3orf58Q8NDZ4 430 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 LNX1Q8TBB1 728 aaPredicted RBP14.42□□□□□ -0.1
SMAD3-213ENST00000560175 C7orf25Q9BPX7 421 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 PHF7Q9BWX1 381 aaPredicted RBP14.42□□□□□ -0.1
SMAD3-213ENST00000560175 TRIM9Q9C026 710 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 ZHX3Q9H4I2 956 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 MAGEF1Q9HAY2 307 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 ANKFY1Q9P2R3 1169 aa14.42□□□□□ -0.1
SMAD3-213ENST00000560175 CPSF3Q9UKF6 684 aaKnown RBP14.42□□□□□ -0.1
SMAD3-213ENST00000560175 FAM237AA0A1B0GTK4 181 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 PI4K2BG5E9Z4 385 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 B3GAT3O94766 335 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 ADH1AP07327 375 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 CYP3A5P20815 502 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 KLRC2P26717 231 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 ADSSP30520 456 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 TNFSF9P41273 254 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 AMPD3Q01432 767 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 KCNA1Q09470 495 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 ENOX2Q16206 610 aaKnown RBP14.41□□□□□ -0.1
SMAD3-213ENST00000560175 FOXD4L6Q3SYB3 417 aaPredicted RBP14.41□□□□□ -0.1
SMAD3-213ENST00000560175 HERC4Q5GLZ8 1057 aaPredicted RBP14.41□□□□□ -0.1
SMAD3-213ENST00000560175 L1TD1Q5T7N2 865 aaKnown RBP14.41□□□□□ -0.1
SMAD3-213ENST00000560175 FAM171A1Q5VUB5 890 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 FOXD4L3Q6VB84 417 aaPredicted RBP14.41□□□□□ -0.1
SMAD3-213ENST00000560175 CMASQ8NFW8 434 aaPredicted RBP14.41□□□□□ -0.1
SMAD3-213ENST00000560175 LEO1Q8WVC0 666 aaPredicted RBP14.41□□□□□ -0.1
SMAD3-213ENST00000560175 KHSRPQ92945 711 aaKnown RBP eCLIP14.41□□□□□ -0.12e-8■■■■■ 28.6
SMAD3-213ENST00000560175 BICD1Q96G01 975 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 FBXL18Q96ME1 805 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 POP1Q99575 1024 aaKnown RBP14.41□□□□□ -0.1
SMAD3-213ENST00000560175 TTPALQ9BTX7 342 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 MRPL44Q9H9J2 332 aaKnown RBP14.41□□□□□ -0.1
SMAD3-213ENST00000560175 GOLGA2P5Q9HBQ8 144 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 PANK4Q9NVE7 773 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 PCDHB13Q9Y5F0 798 aa14.41□□□□□ -0.1
SMAD3-213ENST00000560175 C2orf16Q68DN1 1984 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 DENND4AQ7Z401 1863 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 TRIOO75962 3097 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 LACTBL1A8MY62 500 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 C2CD2LO14523 706 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 POLR2DO15514 142 aaKnown RBP14.4□□□□□ -0.1
SMAD3-213ENST00000560175 CXCL8P10145 99 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 CMA1P23946 247 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 LRPAP1P30533 357 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 ME1P48163 572 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 CASP5P51878 434 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 CREMQ03060 361 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 POSTNQ15063 836 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 ZBTB41Q5SVQ8 909 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 KIAA1841Q6NSI8 718 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 PDXDC1Q6P996 788 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 CRELD2Q6UXH1 353 aaPredicted RBP14.4□□□□□ -0.1
SMAD3-213ENST00000560175 CYP26C1Q6V0L0 522 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.4□□□□□ -0.1
SMAD3-213ENST00000560175 CD302Q8IX05 232 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 CCDC65Q8IXS2 484 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 RIN2Q8WYP3 895 aaPredicted RBP14.4□□□□□ -0.1
SMAD3-213ENST00000560175 STAMQ92783 540 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 DHX58Q96C10 678 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 B3GALT6Q96L58 329 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 CLSTN3Q9BQT9 956 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 PYM1Q9BRP8 204 aaKnown RBP14.4□□□□□ -0.1
SMAD3-213ENST00000560175 FGFBP2Q9BYJ0 223 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 HPSEQ9Y251 543 aa14.4□□□□□ -0.1
SMAD3-213ENST00000560175 MYO10Q9HD67 2058 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 TISP43B9A030 160 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 TRAPPC3O43617 180 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 TBC1D4O60343 1298 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 HARSP12081 509 aaKnown RBP14.39□□□□□ -0.11
SMAD3-213ENST00000560175 IDEP14735 1019 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 KRT85P78386 507 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms