RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 PTGESO14684 152 aa11.93□□□□□ -0.5
TRAF3-207ENST00000559734 HRO43593 1189 aa11.93□□□□□ -0.5
TRAF3-207ENST00000559734 CCNT1O60563 726 aaKnown RBP11.93□□□□□ -0.5
TRAF3-207ENST00000559734 RECQL4O94761 1208 aa11.93□□□□□ -0.5
TRAF3-207ENST00000559734 PTPN2P17706 415 aa11.93□□□□□ -0.5
TRAF3-207ENST00000559734 LIG1P18858 919 aa11.93□□□□□ -0.5
TRAF3-207ENST00000559734 GLRA2P23416 452 aa11.93□□□□□ -0.5
TRAF3-207ENST00000559734 FCARP24071 287 aa11.93□□□□□ -0.5
TRAF3-207ENST00000559734 CCNE1P24864 410 aa11.93□□□□□ -0.5
TRAF3-207ENST00000559734 TKTP29401 623 aaKnown RBP11.93□□□□□ -0.5
TRAF3-207ENST00000559734 PMLP29590 882 aa11.93□□□□□ -0.5
TRAF3-207ENST00000559734 ARPP19P56211 112 aa11.93□□□□□ -0.5
TRAF3-207ENST00000559734 KRT25Q7Z3Z0 450 aa11.93□□□□□ -0.5
TRAF3-207ENST00000559734 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
TRAF3-207ENST00000559734 ZNF687Q8N1G0 1237 aa11.93□□□□□ -0.5
TRAF3-207ENST00000559734 FAM20AQ96MK3 541 aa11.93□□□□□ -0.5
TRAF3-207ENST00000559734 AIFM3Q96NN9 605 aa11.93□□□□□ -0.5
TRAF3-207ENST00000559734 CXCL16Q9H2A7 254 aa11.93□□□□□ -0.5
TRAF3-207ENST00000559734 ZNF334Q9HCZ1 680 aaPredicted RBP11.93□□□□□ -0.5
TRAF3-207ENST00000559734 KCNMB3Q9NPA1 279 aa11.93□□□□□ -0.5
TRAF3-207ENST00000559734 SH2B1Q9NRF2 756 aaPredicted RBP11.93□□□□□ -0.5
TRAF3-207ENST00000559734 A0A1B0GUA9 196 aa11.92□□□□□ -0.5
TRAF3-207ENST00000559734 CCDC194A0A1B0GVG4 234 aa11.92□□□□□ -0.5
TRAF3-207ENST00000559734 ZNF263O14978 683 aa11.92□□□□□ -0.5
TRAF3-207ENST00000559734 TBX3O15119 743 aa11.92□□□□□ -0.5
TRAF3-207ENST00000559734 USO1O60763 962 aaKnown RBP11.92□□□□□ -0.5
TRAF3-207ENST00000559734 B3GAT3O94766 335 aa11.92□□□□□ -0.5
TRAF3-207ENST00000559734 IGFBP6P24592 240 aaPredicted RBP11.92□□□□□ -0.5
TRAF3-207ENST00000559734 ARL2P36404 184 aa11.92□□□□□ -0.5
TRAF3-207ENST00000559734 SF3A2Q15428 464 aaKnown RBP11.92□□□□□ -0.5
TRAF3-207ENST00000559734 GLRA4Q5JXX5 417 aa11.92□□□□□ -0.5
TRAF3-207ENST00000559734 PPP4R3AQ6IN85 833 aa11.92□□□□□ -0.5
TRAF3-207ENST00000559734 VITQ6UXI7 678 aa11.92□□□□□ -0.5
TRAF3-207ENST00000559734 PDZD4Q76G19 769 aaPredicted RBP11.92□□□□□ -0.5
TRAF3-207ENST00000559734 NEK8Q86SG6 692 aa11.92□□□□□ -0.5
TRAF3-207ENST00000559734 LONP2Q86WA8 852 aa11.92□□□□□ -0.5
TRAF3-207ENST00000559734 FAM160A2Q8N612 972 aaPredicted RBP11.92□□□□□ -0.5
TRAF3-207ENST00000559734 CYP4F11Q9HBI6 524 aa11.92□□□□□ -0.5
TRAF3-207ENST00000559734 RBM12Q9NTZ6 932 aaKnown RBP11.92□□□□□ -0.5
TRAF3-207ENST00000559734 KCNJ14Q9UNX9 436 aa11.92□□□□□ -0.5
TRAF3-207ENST00000559734 GDAQ9Y2T3 454 aa11.92□□□□□ -0.5
TRAF3-207ENST00000559734 ARID2Q68CP9 1835 aa11.92□□□□□ -0.5
TRAF3-207ENST00000559734 WDR27A2RRH5 827 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 M0R2N6 131 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 NRG2O14511 850 aaPredicted RBP11.91□□□□□ -0.5
TRAF3-207ENST00000559734 CPLX1O14810 134 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 N4BP3O15049 544 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 AXIN1O15169 862 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 FOXD2O60548 495 aaPredicted RBP11.91□□□□□ -0.5
TRAF3-207ENST00000559734 DGAT1O75907 488 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 DEXIO95424 95 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 PRKCBP05771 671 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 CHRNB1P11230 501 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 GJA1P17302 382 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 PSMC3P17980 439 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 FGFR3P22607 806 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 VIPR2P41587 438 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 BRCC3P46736 316 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 ROR1Q01973 937 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 POU5F1BQ06416 359 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 LRRC32Q14392 662 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 GAS6Q14393 721 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 PRSS36Q5K4E3 855 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 Q6ZS52 159 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 ANKS3Q6ZW76 656 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 NOSTRINQ8IVI9 506 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 ZBTB8OSQ8IWT0 167 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 DAGLBQ8NCG7 672 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 CSGALNACT1Q8TDX6 532 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 HAS1Q92839 578 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 DDX27Q96GQ7 796 aaKnown RBP11.91□□□□□ -0.5
TRAF3-207ENST00000559734 ZSWIM3Q96MP5 696 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 ASB16Q96NS5 453 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 ADPGKQ9BRR6 497 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 NFKBIZQ9BYH8 718 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 ARRDC1-AS1Q9H2J1 176 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 PDZD7Q9H5P4 517 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 GPRC5CQ9NQ84 441 aa11.91□□□□□ -0.5
TRAF3-207ENST00000559734 PRMT7Q9NVM4 692 aaPredicted RBP11.91□□□□□ -0.5
TRAF3-207ENST00000559734 A0A087WWV3 80 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 SLC38A8A6NNN8 435 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 ZNF197O14709 1029 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 MYL4P12829 197 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 GCFC2P16383 781 aaKnown RBP11.9□□□□□ -0.5
TRAF3-207ENST00000559734 RPS6KB1P23443 525 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 PDIA3P30101 505 aaKnown RBP11.9□□□□□ -0.5
TRAF3-207ENST00000559734 CNR2P34972 360 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 CCR2P41597 374 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 SOX9P48436 509 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 CLCNKBP51801 687 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 KPNA1P52294 538 aaPredicted RBP11.9□□□□□ -0.5
TRAF3-207ENST00000559734 SPIRE1Q08AE8 756 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 CYP4A22Q5TCH4 519 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 MAMSTRQ6ZN01 415 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 PIK3AP1Q6ZUJ8 805 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 RTL10Q7L3V2 364 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 MAP4K3Q8IVH8 894 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 YAF2Q8IY57 180 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 HS6ST3Q8IZP7 471 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 ELMOD1Q8N336 334 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms