RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 AHRRA9YTQ3 701 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 PJA2O43164 708 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 DDCP20711 480 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 FXR1P51114 621 aaKnown RBP eCLIP4.39□□□□□ -1.71
CASC4-210ENST00000559550 CLRN1P58418 232 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
CASC4-210ENST00000559550 RAP2BP61225 183 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 NHLH2Q02577 135 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 UAP1L1Q3KQV9 507 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 PLEKHG6Q3KR16 790 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 RABL3Q5HYI8 236 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 TMEM240Q5SV17 173 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 METRNLQ641Q3 311 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 DRICH1Q6PGQ1 229 aaPredicted RBP4.39□□□□□ -1.71
CASC4-210ENST00000559550 MIGA2Q7L4E1 593 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 ZNF627Q7L945 461 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 CASKIN2Q8WXE0 1202 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 HDAC10Q969S8 669 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 CYFIP2Q96F07 1278 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 NDC1Q9BTX1 674 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 TEX101Q9BY14 249 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 ZNF768Q9H5H4 540 aaKnown RBP4.39□□□□□ -1.71
CASC4-210ENST00000559550 AASDHPPTQ9NRN7 309 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 TMEM140Q9NV12 185 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 MOCS1Q9NZB8 636 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 IP6K2Q9UHH9 426 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 SORCS3Q9UPU3 1222 aa4.39□□□□□ -1.71
CASC4-210ENST00000559550 ABLIM3O94929 683 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 SNRPA1P09661 255 aaKnown RBP4.38□□□□□ -1.71
CASC4-210ENST00000559550 ATP5JP18859 108 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 KRT4P19013 534 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 NR4A1P22736 598 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 ZFP36P26651 326 aaKnown RBP4.38□□□□□ -1.71
CASC4-210ENST00000559550 RAB27AP51159 221 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 CHN2P52757 468 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 FAM189BP81408 668 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 DSC2Q02487 901 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 CCDC142Q17RM4 750 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 RRP12Q5JTH9 1297 aaKnown RBP4.38□□□□□ -1.71
CASC4-210ENST00000559550 ATXN7L2Q5T6C5 722 aaPredicted RBP4.38□□□□□ -1.71
CASC4-210ENST00000559550 OTUD7BQ6GQQ9 843 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 EFCAB12Q6NXP0 572 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 Q6ZPA2 131 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 UBE3BQ7Z3V4 1068 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 MRGPRGQ86SM5 289 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 DCBLD1Q8N8Z6 715 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 ZFP28Q8NHY6 868 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 IFI44Q8TCB0 444 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 CPT1CQ8TCG5 803 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 TMX3Q96JJ7 454 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 PHACTR3Q96KR7 559 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 DMRTA2Q96SC8 542 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 RTFDC1Q9BY42 306 aaPredicted RBP4.38□□□□□ -1.71
CASC4-210ENST00000559550 MANSC1Q9H8J5 431 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 TDP1Q9NUW8 608 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 FBXO34Q9NWN3 711 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 PARPBPQ9NWS1 579 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 POGKQ9P215 609 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 CHST2Q9Y4C5 530 aa4.38□□□□□ -1.71
CASC4-210ENST00000559550 TCRBV7S2A1N4TA0A589 114 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 LRRC14BA6NHZ5 514 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 DRGXA6NNA5 263 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 ZNF185O15231 689 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 AKAP10O43572 662 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 SCAF4O95104 1147 aaKnown RBP4.37□□□□□ -1.71
CASC4-210ENST00000559550 IL33O95760 270 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 ZSCAN20P17040 1043 aaPredicted RBP4.37□□□□□ -1.71
CASC4-210ENST00000559550 SLC6A2P23975 617 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 RNASE9P60153 205 aaKnown RBP4.37□□□□□ -1.71
CASC4-210ENST00000559550 CDC42EP1Q00587 391 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 FAM102AQ5T9C2 384 aaPredicted RBP4.37□□□□□ -1.71
CASC4-210ENST00000559550 ZNF529Q6P280 563 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 SEM1Q6ZVN7 128 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 CATIPQ7Z7H3 387 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 GLCCI1Q86VQ1 547 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 MIER2Q8N344 545 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 HSPBAP1Q96EW2 488 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 MRGPRX4Q96LA9 322 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 RHOBTB2Q9BYZ6 727 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 MMRN2Q9H8L6 949 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 TCF7L1Q9HCS4 588 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 SLC2A4RGQ9NR83 387 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.37□□□□□ -1.71
CASC4-210ENST00000559550 EIF2B4Q9UI10 523 aaKnown RBP4.37□□□□□ -1.71
CASC4-210ENST00000559550 CLCA2Q9UQC9 943 aa4.37□□□□□ -1.71
CASC4-210ENST00000559550 TRIM24O15164 1050 aa4.36□□□□□ -1.71
CASC4-210ENST00000559550 SGTAO43765 313 aa4.36□□□□□ -1.71
CASC4-210ENST00000559550 PRSS23O95084 383 aa4.36□□□□□ -1.71
CASC4-210ENST00000559550 SBK3P0C264 359 aa4.36□□□□□ -1.71
CASC4-210ENST00000559550 PF4V1P10720 104 aa4.36□□□□□ -1.71
CASC4-210ENST00000559550 PDCP20941 246 aa4.36□□□□□ -1.71
CASC4-210ENST00000559550 MGAT1P26572 445 aa4.36□□□□□ -1.71
CASC4-210ENST00000559550 SLC6A4P31645 630 aa4.36□□□□□ -1.71
CASC4-210ENST00000559550 ZNF280AP59817 542 aaPredicted RBP4.36□□□□□ -1.71
CASC4-210ENST00000559550 CTXN1P60606 82 aa4.36□□□□□ -1.71
CASC4-210ENST00000559550 PIN1Q13526 163 aaPredicted RBP4.36□□□□□ -1.71
CASC4-210ENST00000559550 UBXN2BQ14CS0 331 aa4.36□□□□□ -1.71
CASC4-210ENST00000559550 PDCD4Q53EL6 469 aaKnown RBP4.36□□□□□ -1.71
CASC4-210ENST00000559550 ODR4Q5SWX8 454 aa4.36□□□□□ -1.71
CASC4-210ENST00000559550 MED25Q71SY5 747 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms