RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 NAP1L3Q99457 506 aaPredicted RBP11.86□□□□□ -0.51
SPG11-217ENST00000559511 TARS2Q9BW92 718 aaKnown RBP11.86□□□□□ -0.51
SPG11-217ENST00000559511 DPH5Q9H2P9 285 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 KIAA1586Q9HCI6 787 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 ANKFY1Q9P2R3 1169 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 GTF3C4Q9UKN8 822 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 PLAAQ9Y263 795 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 EVPLQ92817 2033 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 MGAMO43451 1857 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 PCNTO95613 3336 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 K7ERI5 159 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 VNN1O95497 513 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 DR1Q01658 176 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 NEDD9Q14511 834 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 TARBP2Q15633 366 aaKnown RBP11.85□□□□□ -0.51
SPG11-217ENST00000559511 LY6KQ17RY6 165 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 KCTD16Q68DU8 428 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 FOXR1Q6PIV2 292 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 ENOSF1Q7L5Y1 443 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 CD302Q8IX05 232 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 GLG1Q92896 1179 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 MMP19Q99542 508 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 TRIM31Q9BZY9 425 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 KCNG1Q9UIX4 513 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 CLEC11AQ9Y240 323 aa11.85□□□□□ -0.51
SPG11-217ENST00000559511 UTP11Q9Y3A2 253 aaKnown RBP11.85□□□□□ -0.51
SPG11-217ENST00000559511 GOLGA6L10A0A0M3HER8 536 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 ARIH2O95376 493 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 GGPS1O95749 300 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 CYP2C8P10632 490 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 PYGMP11217 842 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 UNGP13051 313 aaPredicted RBP11.84□□□□□ -0.51
SPG11-217ENST00000559511 PIK3CAP42336 1068 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 CAPSQ13938 189 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 KCTD2Q14681 263 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 DNAJC21Q5F1R6 531 aaKnown RBP11.84□□□□□ -0.51
SPG11-217ENST00000559511 MAP1SQ66K74 1059 aaPredicted RBP11.84□□□□□ -0.51
SPG11-217ENST00000559511 SCARA3Q6AZY7 606 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 C18orf8Q96DM3 657 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 MSTO1Q9BUK6 570 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 WNT8AQ9H1J5 351 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 MROH8Q9H579 483 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 ZNF408Q9H9D4 720 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 RBAKQ9NYW8 714 aaPredicted RBP11.84□□□□□ -0.51
SPG11-217ENST00000559511 UVRAGQ9P2Y5 699 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 CNOT8Q9UFF9 292 aaKnown RBP11.84□□□□□ -0.51
SPG11-217ENST00000559511 ADGRA2Q96PE1 1338 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 A0A0B4J269 797 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 TCRBV7S2A1N4TA0A589 114 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 TTLL13PA6NNM8 815 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 H0YGN5 161 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 SPOPO43791 374 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 CTNNA1P35221 906 aaKnown RBP11.84□□□□□ -0.51
SPG11-217ENST00000559511 TCF7P36402 384 aaPredicted RBP11.84□□□□□ -0.51
SPG11-217ENST00000559511 RFC5P40937 340 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 STAT5BP51692 787 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 BIRC3Q13489 604 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 SEZ6Q53EL9 994 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 PRELID2Q8N945 189 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 MORC4Q8TE76 937 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 APOBEC3GQ9HC16 384 aaKnown RBP11.84□□□□□ -0.51
SPG11-217ENST00000559511 FAM114A2Q9NRY5 505 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 NFS1Q9Y697 457 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 CNTNAP2Q9UHC6 1331 aa11.84□□□□□ -0.51
SPG11-217ENST00000559511 KIAA0391O15091 583 aaKnown RBP11.83□□□□□ -0.52
SPG11-217ENST00000559511 PHF2O75151 1096 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 ACO1P21399 889 aaKnown RBP11.83□□□□□ -0.52
SPG11-217ENST00000559511 CTNNA2P26232 953 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 CLUL1Q15846 466 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 WDR44Q5JSH3 913 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 CEP85LQ5SZL2 805 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 WDR78Q5VTH9 848 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 DUPD1Q68J44 220 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 SLFN12LQ6IEE8 588 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 METTL7BQ6UX53 244 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 TMC3Q7Z5M5 1100 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 OR2W6PQ8NHA6 318 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 CPA5Q8WXQ8 436 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 LRRC45Q96CN5 670 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 MPHOSPH6Q99547 160 aaKnown RBP11.83□□□□□ -0.52
SPG11-217ENST00000559511 TRIM7Q9C029 511 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 RAB17Q9H0T7 212 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 PCDHA3Q9Y5H8 950 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 ANK1P16157 1881 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 MAFO75444 373 aaPredicted RBP11.83□□□□□ -0.52
SPG11-217ENST00000559511 CFHP08603 1231 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 HARSP12081 509 aaKnown RBP11.83□□□□□ -0.52
SPG11-217ENST00000559511 SCP2P22307 547 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 PTGIRP43119 386 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 PPP2R5EQ16537 467 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 C2CD6Q53TS8 623 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 SEL1L2Q5TEA6 688 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 TTC19Q6DKK2 380 aaPredicted RBP11.83□□□□□ -0.52
SPG11-217ENST00000559511 LLGL2Q6P1M3 1020 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 TTC27Q6P3X3 843 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 JAMLQ86YT9 394 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 MCOLN2Q8IZK6 566 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 SHCBP1Q8NEM2 672 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 OR5B17Q8NGF7 314 aa11.83□□□□□ -0.52
SPG11-217ENST00000559511 SEPT1Q8WYJ6 367 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms