RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 MRPL4Q9BYD3 311 aaKnown RBP22.49■■□□□ 1.19
TSPAN3-206ENST00000559373 PTPRHQ9HD43 1115 aa22.49■■□□□ 1.19
TSPAN3-206ENST00000559373 HCFC1R1Q9NWW0 138 aa22.49■■□□□ 1.19
TSPAN3-206ENST00000559373 ARHGAP28Q9P2N2 729 aa22.49■■□□□ 1.19
TSPAN3-206ENST00000559373 CDY1Q9Y6F8 540 aa22.49■■□□□ 1.19
TSPAN3-206ENST00000559373 KRBA1A5PL33 1030 aa22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 LAD1O00515 517 aa22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 LAMP2P13473 410 aa22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 FSHRP23945 695 aa22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 GRM5P41594 1212 aa22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 ATP2C1P98194 919 aaPredicted RBP22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 AXDND1Q5T1B0 1012 aaPredicted RBP22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 LIN9Q5TKA1 542 aa22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 CYP26C1Q6V0L0 522 aa22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 GPR65Q8IYL9 337 aa22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 SLC7A14Q8TBB6 771 aa22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 C18orf25Q96B23 403 aaPredicted RBP22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 DRC1Q96MC2 740 aa22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 CCDC94Q9BW85 323 aaPredicted RBP22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 TMEM134Q9H6X4 195 aa22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 ANKFY1Q9P2R3 1169 aa22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 EPS15L1Q9UBC2 864 aa22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 STK24Q9Y6E0 443 aa22.48■■□□□ 1.19
TSPAN3-206ENST00000559373 WDR87Q6ZQQ6 2873 aa22.47■■□□□ 1.19
TSPAN3-206ENST00000559373 MEFVO15553 781 aaPredicted RBP22.47■■□□□ 1.19
TSPAN3-206ENST00000559373 FGFR3P22607 806 aa22.47■■□□□ 1.19
TSPAN3-206ENST00000559373 YARSP54577 528 aaKnown RBP22.47■■□□□ 1.19
TSPAN3-206ENST00000559373 DHX8Q14562 1220 aaKnown RBP22.47■■□□□ 1.19
TSPAN3-206ENST00000559373 RILPL1Q5EBL4 403 aa22.47■■□□□ 1.19
TSPAN3-206ENST00000559373 DCLRE1AQ6PJP8 1040 aa22.47■■□□□ 1.19
TSPAN3-206ENST00000559373 ALKAL1Q6UXT8 129 aa22.47■■□□□ 1.19
TSPAN3-206ENST00000559373 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.47■■□□□ 1.19
TSPAN3-206ENST00000559373 DDX27Q96GQ7 796 aaKnown RBP22.47■■□□□ 1.19
TSPAN3-206ENST00000559373 RHOBTB2Q9BYZ6 727 aa22.47■■□□□ 1.19
TSPAN3-206ENST00000559373 CACNA1IQ9P0X4 2223 aa22.47■■□□□ 1.19
TSPAN3-206ENST00000559373 DMDP11532 3685 aa22.47■■□□□ 1.19
TSPAN3-206ENST00000559373 ABLIM1O14639 778 aa22.46■■□□□ 1.19
TSPAN3-206ENST00000559373 CLCN5P51795 746 aa22.46■■□□□ 1.19
TSPAN3-206ENST00000559373 ARPP19P56211 112 aa22.46■■□□□ 1.19
TSPAN3-206ENST00000559373 SPAG1Q07617 926 aa22.46■■□□□ 1.19
TSPAN3-206ENST00000559373 ELAVL2Q12926 359 aaKnown RBP22.46■■□□□ 1.19
TSPAN3-206ENST00000559373 APBB1IPQ7Z5R6 666 aaPredicted RBP22.46■■□□□ 1.19
TSPAN3-206ENST00000559373 ITFG1Q8TB96 612 aa22.46■■□□□ 1.19
TSPAN3-206ENST00000559373 GPR152Q8TDT2 470 aa22.46■■□□□ 1.19
TSPAN3-206ENST00000559373 ACAP3Q96P50 834 aa22.46■■□□□ 1.19
TSPAN3-206ENST00000559373 MTRRQ9UBK8 725 aa22.46■■□□□ 1.19
TSPAN3-206ENST00000559373 KIF3AQ9Y496 699 aa22.46■■□□□ 1.19
TSPAN3-206ENST00000559373 NUMBLQ9Y6R0 609 aa22.46■■□□□ 1.19
TSPAN3-206ENST00000559373 PAPLNO95428 1278 aa22.45■■□□□ 1.18
TSPAN3-206ENST00000559373 PLA2G4BP0C869 781 aa22.45■■□□□ 1.18
TSPAN3-206ENST00000559373 PARM1Q6UWI2 310 aa22.45■■□□□ 1.18
TSPAN3-206ENST00000559373 MPZL3Q6UWV2 235 aa22.45■■□□□ 1.18
TSPAN3-206ENST00000559373 ING5Q8WYH8 240 aa22.45■■□□□ 1.18
TSPAN3-206ENST00000559373 FGF14Q92915 247 aa22.45■■□□□ 1.18
TSPAN3-206ENST00000559373 SNX27Q96L92 541 aa22.45■■□□□ 1.18
TSPAN3-206ENST00000559373 TOPORSQ9NS56 1045 aaPredicted RBP22.45■■□□□ 1.18
TSPAN3-206ENST00000559373 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.45■■□□□ 1.18
TSPAN3-206ENST00000559373 TMEM189-UBE2V1I3L0A0 370 aa22.44■■□□□ 1.18
TSPAN3-206ENST00000559373 PODXLO00592 558 aa22.44■■□□□ 1.18
TSPAN3-206ENST00000559373 GFRA3O60609 400 aa22.44■■□□□ 1.18
TSPAN3-206ENST00000559373 PROZP22891 400 aa22.44■■□□□ 1.18
TSPAN3-206ENST00000559373 SCN1AP35498 2009 aa22.44■■□□□ 1.18
TSPAN3-206ENST00000559373 MATR3P43243 847 aaKnown RBP eCLIP22.44■■□□□ 1.18
TSPAN3-206ENST00000559373 SLC12A3P55017 1021 aa22.44■■□□□ 1.18
TSPAN3-206ENST00000559373 HTR4Q13639 388 aa22.44■■□□□ 1.18
TSPAN3-206ENST00000559373 RAB33AQ14088 237 aa22.44■■□□□ 1.18
TSPAN3-206ENST00000559373 SYT2Q8N9I0 419 aaPredicted RBP22.44■■□□□ 1.18
TSPAN3-206ENST00000559373 LRRC15Q8TF66 581 aa22.44■■□□□ 1.18
TSPAN3-206ENST00000559373 CDK5RAP3Q96JB5 506 aa22.44■■□□□ 1.18
TSPAN3-206ENST00000559373 UROC1Q96N76 676 aa22.44■■□□□ 1.18
TSPAN3-206ENST00000559373 HAPLN2Q9GZV7 340 aa22.44■■□□□ 1.18
TSPAN3-206ENST00000559373 SMC3Q9UQE7 1217 aa22.44■■□□□ 1.18
TSPAN3-206ENST00000559373 RBM19Q9Y4C8 960 aaKnown RBP22.44■■□□□ 1.18
TSPAN3-206ENST00000559373 C1RP00736 705 aa22.43■■□□□ 1.18
TSPAN3-206ENST00000559373 MCF2P10911 925 aa22.43■■□□□ 1.18
TSPAN3-206ENST00000559373 SRFP11831 508 aa22.43■■□□□ 1.18
TSPAN3-206ENST00000559373 PLS3P13797 630 aa22.43■■□□□ 1.18
TSPAN3-206ENST00000559373 AOC1P19801 751 aa22.43■■□□□ 1.18
TSPAN3-206ENST00000559373 RFX1P22670 979 aa22.43■■□□□ 1.18
TSPAN3-206ENST00000559373 GUCY2CP25092 1073 aa22.43■■□□□ 1.18
TSPAN3-206ENST00000559373 GRIN1Q05586 938 aa22.43■■□□□ 1.18
TSPAN3-206ENST00000559373 STRN3Q13033 797 aa22.43■■□□□ 1.18
TSPAN3-206ENST00000559373 ARSHQ5FYA8 562 aa22.43■■□□□ 1.18
TSPAN3-206ENST00000559373 XKR4Q5GH76 650 aa22.43■■□□□ 1.18
TSPAN3-206ENST00000559373 HYIQ5T013 277 aa22.43■■□□□ 1.18
TSPAN3-206ENST00000559373 TMEM161BQ8NDZ6 487 aa22.43■■□□□ 1.18
TSPAN3-206ENST00000559373 DNMT3BQ9UBC3 853 aaKnown RBP22.43■■□□□ 1.18
TSPAN3-206ENST00000559373 PTPRZ1P23471 2315 aaPredicted RBP22.43■■□□□ 1.18
TSPAN3-206ENST00000559373 ANHXE9PGG2 379 aa22.42■■□□□ 1.18
TSPAN3-206ENST00000559373 HNRNPA1P09651 372 aaKnown RBP eCLIP22.42■■□□□ 1.18
TSPAN3-206ENST00000559373 MAPTP10636 758 aaKnown RBP22.42■■□□□ 1.18
TSPAN3-206ENST00000559373 SLC10A6Q3KNW5 377 aa22.42■■□□□ 1.18
TSPAN3-206ENST00000559373 SPECC1Q5M775 1068 aa22.42■■□□□ 1.18
TSPAN3-206ENST00000559373 VARS2Q5ST30 1063 aaKnown RBP22.42■■□□□ 1.18
TSPAN3-206ENST00000559373 LARP1BQ659C4 914 aaKnown RBP22.42■■□□□ 1.18
TSPAN3-206ENST00000559373 PDXDC1Q6P996 788 aa22.42■■□□□ 1.18
TSPAN3-206ENST00000559373 FGF13Q92913 245 aa22.42■■□□□ 1.18
TSPAN3-206ENST00000559373 WNT16Q9UBV4 365 aa22.42■■□□□ 1.18
TSPAN3-206ENST00000559373 TUBGCP4Q9UGJ1 667 aa22.42■■□□□ 1.18
TSPAN3-206ENST00000559373 CDH7Q9ULB5 785 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms