RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 MBTPS2O43462 519 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 CLASP2O75122 1294 aaKnown RBP4.76□□□□□ -1.65
SNX1-205ENST00000559339 TBX10O75333 385 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 KIF4AO95239 1232 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 GLP2RO95838 553 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 LDHAP00338 332 aaKnown RBP4.76□□□□□ -1.65
SNX1-205ENST00000559339 GLUD1P00367 558 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 C1RP00736 705 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 PIGRP01833 764 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 EDN1P05305 212 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 MYL1P05976 194 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 CNPP09543 421 aaKnown RBP4.76□□□□□ -1.65
SNX1-205ENST00000559339 ALADP13716 330 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 IL9P15248 144 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 KCNE1P15382 129 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 CYP3A5P20815 502 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 PAX3P23760 479 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 CMA1P23946 247 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 LTBRP36941 435 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 CLCN4P51793 760 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 CLCN6P51797 869 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 CLCNKBP51801 687 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 ASIC1P78348 528 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 POU5F1Q01860 360 aaKnown RBP4.76□□□□□ -1.65
SNX1-205ENST00000559339 DSG1Q02413 1049 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 DLX2Q07687 328 aaPredicted RBP4.76□□□□□ -1.65
SNX1-205ENST00000559339 CBX2Q14781 532 aaPredicted RBP4.76□□□□□ -1.65
SNX1-205ENST00000559339 PTPN14Q15678 1187 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 UPP1Q16831 310 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 RALGAPA2Q2PPJ7 1873 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 ZC2HC1CQ53FD0 456 aaPredicted RBP4.76□□□□□ -1.65
SNX1-205ENST00000559339 XKR4Q5GH76 650 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 ATAT1Q5SQI0 421 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 AXDND1Q5T1B0 1012 aaPredicted RBP4.76□□□□□ -1.65
SNX1-205ENST00000559339 L1TD1Q5T7N2 865 aaKnown RBP4.76□□□□□ -1.65
SNX1-205ENST00000559339 FAM171A1Q5VUB5 890 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 RESP18Q5W5W9 173 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 ANKRD54Q6NXT1 300 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 SHC4Q6S5L8 630 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 ALKAL1Q6UXT8 129 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 ANKS3Q6ZW76 656 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 ADHFE1Q8IWW8 467 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 CEP120Q8N960 986 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 APPL2Q8NEU8 664 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 LRRC15Q8TF66 581 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 HASPINQ8TF76 798 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 BCL7CQ8WUZ0 217 aaPredicted RBP4.76□□□□□ -1.65
SNX1-205ENST00000559339 RIN2Q8WYP3 895 aaPredicted RBP4.76□□□□□ -1.65
SNX1-205ENST00000559339 RABGGTAQ92696 567 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 STAMQ92783 540 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 CCDC47Q96A33 483 aaKnown RBP4.76□□□□□ -1.65
SNX1-205ENST00000559339 DNAJC19Q96DA6 116 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 ZBTB45Q96K62 511 aaPredicted RBP4.76□□□□□ -1.65
SNX1-205ENST00000559339 MSLNLQ96KJ4 702 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 FBXL18Q96ME1 805 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 RIPOR3Q96MK2 946 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 KLHL5Q96PQ7 755 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 PPP1R10Q96QC0 940 aaKnown RBP4.76□□□□□ -1.65
SNX1-205ENST00000559339 HERC2P3Q9BVR0 1158 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 GPR62Q9BZJ7 368 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 TRIM9Q9C026 710 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 ADAM7Q9H2U9 754 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 PLEKHA4Q9H4M7 779 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 ASB7Q9H672 318 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 SFXN1Q9H9B4 322 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 CHST7Q9NS84 486 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 KBTBD4Q9NVX7 518 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 MARCH5Q9NX47 278 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 TBC1D7Q9P0N9 293 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 CLEC1BQ9P126 229 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 FNIP2Q9P278 1114 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 USP25Q9UHP3 1055 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 AGO2Q9UKV8 859 aaKnown RBP4.76□□□□□ -1.65
SNX1-205ENST00000559339 NR2E1Q9Y466 385 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 WDR81Q562E7 1941 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 LOXHD1Q8IVV2 1947 aa4.76□□□□□ -1.65
SNX1-205ENST00000559339 A0A087X0B3 334 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 PVALEFA0A1B0GWK0 134 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 TTC26A0AVF1 554 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 FRMD3A2A2Y4 597 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 F8W810 466 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 H7C4K7 107 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 ABLIM1O14639 778 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 SYN3O14994 580 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 EIF3DO15371 548 aaKnown RBP eCLIP4.75□□□□□ -1.65
SNX1-205ENST00000559339 TEX28O15482 410 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 B4GALT3O60512 393 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 LILRB3O75022 631 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 KIF20AO95235 890 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 IL18RAPO95256 599 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 SLFN14P0C7P3 912 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 CXCL8P10145 99 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 GARTP22102 1010 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 MCM4P33991 863 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 ANP32AP39687 249 aaKnown RBP4.75□□□□□ -1.65
SNX1-205ENST00000559339 MTHFRP42898 656 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 SYKP43405 635 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 AFMP43652 599 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 ACOT2P49753 483 aa4.75□□□□□ -1.65
SNX1-205ENST00000559339 SNRPFP62306 86 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms