RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 GATMP50440 423 aa16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 YARSP54577 528 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 GRIK3Q13003 919 aa16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 NOMO2Q5JPE7 1267 aa16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 GLB1LQ6UWU2 654 aa16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 GAS2L3Q86XJ1 694 aa16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 WDR49Q8IV35 697 aa16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 CMTR2Q8IYT2 770 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 AOPEPQ8N6M6 819 aa16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 HELQQ8TDG4 1101 aa16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 ZNF516Q92618 1163 aa16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 TSPY26PQ9H489 355 aa16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 CWH43Q9H720 699 aa16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 METTL14Q9HCE5 456 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 TBC1D13Q9NVG8 400 aa16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 FANCLQ9NW38 375 aa16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 MTMR10Q9NXD2 777 aa16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 PARP2Q9UGN5 583 aa16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 CHD9Q3L8U1 2897 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 ZBBXA8MT70 800 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 FGFR1OPO95684 399 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 EFEMP2O95967 443 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 EPB41P11171 864 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 LRPAP1P30533 357 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 SCNN1GP51170 649 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 DLG4P78352 724 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 PPP2R3AQ06190 1150 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 SOX4Q06945 474 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 CEP135Q66GS9 1140 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 FAM109BQ6ICB4 259 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 JADE1Q6IE81 842 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 RDH13Q8NBN7 331 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 CLP1Q92989 425 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 CNOT6LQ96LI5 555 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 RNPC3Q96LT9 517 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 RAD9AQ99638 391 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 CGRRF1Q99675 332 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 ANP32EQ9BTT0 268 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 APOL6Q9BWW8 343 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 INTS13Q9NVM9 706 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 KLK14Q9P0G3 267 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 KANSL3Q9P2N6 904 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 LRFN2Q9ULH4 789 aa16.06■□□□□ 0.16
SNRPA1-207ENST00000559309 ANO9A1A5B4 782 aa16.05■□□□□ 0.16
SNRPA1-207ENST00000559309 SMTNL1A8MU46 457 aa16.05■□□□□ 0.16
SNRPA1-207ENST00000559309 DDHD2O94830 711 aa16.05■□□□□ 0.16
SNRPA1-207ENST00000559309 C4BPAP04003 597 aaKnown RBP16.05■□□□□ 0.16
SNRPA1-207ENST00000559309 NFICP08651 508 aa16.05■□□□□ 0.16
SNRPA1-207ENST00000559309 EEF1GP26641 437 aaKnown RBP16.05■□□□□ 0.16
SNRPA1-207ENST00000559309 VAMP7P51809 220 aa16.05■□□□□ 0.16
SNRPA1-207ENST00000559309 TCP11X2Q5H9J9 407 aa16.05■□□□□ 0.16
SNRPA1-207ENST00000559309 MIIPQ5JXC2 388 aa16.05■□□□□ 0.16
SNRPA1-207ENST00000559309 Q7L0L9 218 aa16.05■□□□□ 0.16
SNRPA1-207ENST00000559309 COLGALT2Q8IYK4 626 aa16.05■□□□□ 0.16
SNRPA1-207ENST00000559309 MRPL9Q9BYD2 267 aaKnown RBP16.05■□□□□ 0.16
SNRPA1-207ENST00000559309 ARMCX3Q9UH62 379 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-207ENST00000559309 LIMA1Q9UHB6 759 aaKnown RBP16.05■□□□□ 0.16
SNRPA1-207ENST00000559309 COQ4Q9Y3A0 265 aa16.05■□□□□ 0.16
SNRPA1-207ENST00000559309 INSL6Q9Y581 213 aa16.05■□□□□ 0.16
SNRPA1-207ENST00000559309 UPP2O95045 317 aa16.04■□□□□ 0.16
SNRPA1-207ENST00000559309 THP07101 528 aa16.04■□□□□ 0.16
SNRPA1-207ENST00000559309 GTF2H1P32780 548 aa16.04■□□□□ 0.16
SNRPA1-207ENST00000559309 AP3M2P53677 418 aa16.04■□□□□ 0.16
SNRPA1-207ENST00000559309 PPP3CAQ08209 521 aa16.04■□□□□ 0.16
SNRPA1-207ENST00000559309 ZACNQ401N2 412 aa16.04■□□□□ 0.16
SNRPA1-207ENST00000559309 CD300LGQ6UXG3 332 aa16.04■□□□□ 0.16
SNRPA1-207ENST00000559309 LUZP1Q86V48 1076 aa16.04■□□□□ 0.16
SNRPA1-207ENST00000559309 ZNF280BQ86YH2 543 aa16.04■□□□□ 0.16
SNRPA1-207ENST00000559309 LRRC43Q8N309 656 aa16.04■□□□□ 0.16
SNRPA1-207ENST00000559309 RNF169Q8NCN4 708 aa16.04■□□□□ 0.16
SNRPA1-207ENST00000559309 OR5B17Q8NGF7 314 aa16.04■□□□□ 0.16
SNRPA1-207ENST00000559309 POP1Q99575 1024 aaKnown RBP16.04■□□□□ 0.16
SNRPA1-207ENST00000559309 UBQLN1Q9UMX0 589 aaKnown RBP16.04■□□□□ 0.16
SNRPA1-207ENST00000559309 PCDHA11Q9Y5I1 949 aa16.04■□□□□ 0.16
SNRPA1-207ENST00000559309 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 TMEM189-UBE2V1I3L0A0 370 aa16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 TUSC3Q13454 348 aa16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 TMEM132DQ14C87 1099 aa16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 GLRA4Q5JXX5 417 aa16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 SCARA3Q6AZY7 606 aa16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 FAM114A1Q8IWE2 563 aa16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 C1orf127Q8N9H9 656 aa16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 C18orf25Q96B23 403 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 TMEM175Q9BSA9 504 aa16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 NRDE2Q9H7Z3 1164 aa16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 SLC38A7Q9NVC3 462 aa16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 HCSTQ9UBK5 93 aa16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 TUBGCP4Q9UGJ1 667 aa16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 SIX4Q9UIU6 781 aa16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 NLRC5Q86WI3 1866 aa16.03■□□□□ 0.16
SNRPA1-207ENST00000559309 LCHNA4D1U4 455 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 TBKBP1A7MCY6 615 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 GRXCR1A8MXD5 290 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 KCNJ18B7U540 433 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 PIRO00625 290 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 VNN1O95497 513 aa16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 STAU1O95793 577 aaKnown RBP16.02■□□□□ 0.16
SNRPA1-207ENST00000559309 POMCP01189 267 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms