RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 POMKQ9H5K3 350 aa16.71■□□□□ 0.27
RPL28-207ENST00000558815 SFXN1Q9H9B4 322 aa16.71■□□□□ 0.27
RPL28-207ENST00000558815 SLC38A7Q9NVC3 462 aa16.71■□□□□ 0.27
RPL28-207ENST00000558815 MUTYHQ9UIF7 546 aa16.71■□□□□ 0.27
RPL28-207ENST00000558815 C2orf16Q68DN1 1984 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 MEFVO15553 781 aaPredicted RBP16.7■□□□□ 0.26
RPL28-207ENST00000558815 CUTAO60888 179 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 TNFSF9P41273 254 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 MTHFRP42898 656 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 BRCC3P46736 316 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 GTF2BQ00403 316 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 ELAVL2Q12926 359 aaKnown RBP16.7■□□□□ 0.26
RPL28-207ENST00000558815 PSMD5Q16401 504 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 SLC10A6Q3KNW5 377 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 XKR4Q5GH76 650 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 ZBTB41Q5SVQ8 909 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 DCLRE1AQ6PJP8 1040 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 ALKAL1Q6UXT8 129 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 C3orf58Q8NDZ4 430 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 DHX58Q96C10 678 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 FAM212AQ96EL1 285 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 RIPOR3Q96MK2 946 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 UROC1Q96N76 676 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 FIZ1Q96SL8 496 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 TTPALQ9BTX7 342 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 C1QTNF1Q9BXJ1 281 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 MRPL44Q9H9J2 332 aaKnown RBP16.7■□□□□ 0.26
RPL28-207ENST00000558815 RXFP1Q9HBX9 757 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.7■□□□□ 0.26
RPL28-207ENST00000558815 CNTN3Q9P232 1028 aa16.7■□□□□ 0.26
RPL28-207ENST00000558815 NCOR1O75376 2440 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 LOC730098B7Z3J9 87 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 TISP43B9A030 160 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 ANKRD63C9JTQ0 380 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 PI4K2BG5E9Z4 385 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 TULP1O00294 542 aaPredicted RBP16.69■□□□□ 0.26
RPL28-207ENST00000558815 PODXLO00592 558 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 DCXO43602 365 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 GCNT3O95395 438 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 CLTAP09496 248 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 KCNE1P15382 129 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 SCP2P22307 547 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 ME1P48163 572 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 CREMQ03060 361 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 DNM1Q05193 864 aaKnown RBP16.69■□□□□ 0.26
RPL28-207ENST00000558815 UPP1Q16831 310 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 HERC4Q5GLZ8 1057 aaPredicted RBP16.69■□□□□ 0.26
RPL28-207ENST00000558815 ATAT1Q5SQI0 421 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 SLC39A4Q6P5W5 647 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 SHC4Q6S5L8 630 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 MAP4K3Q8IVH8 894 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 TMEM130Q8N3G9 435 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 DNAJC19Q96DA6 116 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 IKZF4Q9H2S9 585 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 TUBGCP4Q9UGJ1 667 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 BDP1A6H8Y1 2624 aa16.69■□□□□ 0.26
RPL28-207ENST00000558815 MTCL1Q9Y4B5 1905 aaKnown RBP16.68■□□□□ 0.26
RPL28-207ENST00000558815 TMEM189-UBE2V1I3L0A0 370 aa16.68■□□□□ 0.26
RPL28-207ENST00000558815 OGTO15294 1046 aa16.68■□□□□ 0.26
RPL28-207ENST00000558815 TGM5O43548 720 aa16.68■□□□□ 0.26
RPL28-207ENST00000558815 PIGRP01833 764 aa16.68■□□□□ 0.26
RPL28-207ENST00000558815 ALADP13716 330 aa16.68■□□□□ 0.26
RPL28-207ENST00000558815 GAP43P17677 238 aa16.68■□□□□ 0.26
RPL28-207ENST00000558815 TKTP29401 623 aaKnown RBP16.68■□□□□ 0.26
RPL28-207ENST00000558815 PPP2R3AQ06190 1150 aa16.68■□□□□ 0.26
RPL28-207ENST00000558815 ELMSAN1Q6PJG2 1045 aa16.68■□□□□ 0.26
RPL28-207ENST00000558815 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.68■□□□□ 0.26
RPL28-207ENST00000558815 KCNG4Q8TDN1 519 aa16.68■□□□□ 0.26
RPL28-207ENST00000558815 KIF12Q96FN5 646 aa16.68■□□□□ 0.26
RPL28-207ENST00000558815 DDX27Q96GQ7 796 aaKnown RBP16.68■□□□□ 0.26
RPL28-207ENST00000558815 NECTIN4Q96NY8 510 aa16.68■□□□□ 0.26
RPL28-207ENST00000558815 RPF1Q9H9Y2 349 aaKnown RBP16.68■□□□□ 0.26
RPL28-207ENST00000558815 PANK4Q9NVE7 773 aa16.68■□□□□ 0.26
RPL28-207ENST00000558815 FNIP2Q9P278 1114 aa16.68■□□□□ 0.26
RPL28-207ENST00000558815 NUB1Q9Y5A7 615 aa16.68■□□□□ 0.26
RPL28-207ENST00000558815 DENND4AQ7Z401 1863 aa16.67■□□□□ 0.26
RPL28-207ENST00000558815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.67■□□□□ 0.26
RPL28-207ENST00000558815 TRAPPC3O43617 180 aa16.67■□□□□ 0.26
RPL28-207ENST00000558815 RFPL2O75678 378 aa16.67■□□□□ 0.26
RPL28-207ENST00000558815 ABCD1P33897 745 aa16.67■□□□□ 0.26
RPL28-207ENST00000558815 TMEM31Q5JXX7 168 aa16.67■□□□□ 0.26
RPL28-207ENST00000558815 ADALQ6DHV7 355 aa16.67■□□□□ 0.26
RPL28-207ENST00000558815 CD300LGQ6UXG3 332 aa16.67■□□□□ 0.26
RPL28-207ENST00000558815 ZNF720Q7Z2F6 126 aa16.67■□□□□ 0.26
RPL28-207ENST00000558815 LNX1Q8TBB1 728 aaPredicted RBP16.67■□□□□ 0.26
RPL28-207ENST00000558815 PIK3R5Q8WYR1 880 aa16.67■□□□□ 0.26
RPL28-207ENST00000558815 KCNN1Q92952 543 aa16.67■□□□□ 0.26
RPL28-207ENST00000558815 CHAMP1Q96JM3 812 aa16.67■□□□□ 0.26
RPL28-207ENST00000558815 SEL1LQ9UBV2 794 aa16.67■□□□□ 0.26
RPL28-207ENST00000558815 DPP7Q9UHL4 492 aa16.67■□□□□ 0.26
RPL28-207ENST00000558815 CFAP45Q9UL16 551 aa16.67■□□□□ 0.26
RPL28-207ENST00000558815 PCDHA7Q9UN72 937 aa16.67■□□□□ 0.26
RPL28-207ENST00000558815 NR2E1Q9Y466 385 aa16.67■□□□□ 0.26
RPL28-207ENST00000558815 A0A0B4J269 797 aa16.66■□□□□ 0.26
RPL28-207ENST00000558815 CCDC195A0A1B0GUA6 201 aa16.66■□□□□ 0.26
RPL28-207ENST00000558815 LACTBL1A8MY62 500 aa16.66■□□□□ 0.26
RPL28-207ENST00000558815 ADAM12O43184 909 aa16.66■□□□□ 0.26
RPL28-207ENST00000558815 ANK1P16157 1881 aa16.66■□□□□ 0.26
RPL28-207ENST00000558815 FGFR3P22607 806 aa16.66■□□□□ 0.26
RPL28-207ENST00000558815 MCM4P33991 863 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms