RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 FAM187BQ17R55 369 aa16.9■□□□□ 0.3
CPNE6-208ENST00000558795 CDCA2Q69YH5 1023 aaPredicted RBP16.9■□□□□ 0.3
CPNE6-208ENST00000558795 RTL10Q7L3V2 364 aa16.9■□□□□ 0.3
CPNE6-208ENST00000558795 CCDC83Q8IWF9 413 aa16.9■□□□□ 0.3
CPNE6-208ENST00000558795 LLPHQ9BRT6 129 aaKnown RBP16.9■□□□□ 0.3
CPNE6-208ENST00000558795 ZSCAN32Q9NX65 697 aa16.9■□□□□ 0.3
CPNE6-208ENST00000558795 DNMT3BQ9UBC3 853 aaKnown RBP16.9■□□□□ 0.3
CPNE6-208ENST00000558795 MTRRQ9UBK8 725 aa16.9■□□□□ 0.3
CPNE6-208ENST00000558795 MRPS17Q9Y2R5 130 aaKnown RBP16.9■□□□□ 0.3
CPNE6-208ENST00000558795 NCOR2Q9Y618 2525 aa16.9■□□□□ 0.3
CPNE6-208ENST00000558795 GPR179Q6PRD1 2367 aa16.89■□□□□ 0.3
CPNE6-208ENST00000558795 NEMFO60524 1076 aa16.89■□□□□ 0.29
CPNE6-208ENST00000558795 LIG1P18858 919 aa16.89■□□□□ 0.29
CPNE6-208ENST00000558795 ZNF852Q6ZMS4 543 aa16.89■□□□□ 0.29
CPNE6-208ENST00000558795 NOSTRINQ8IVI9 506 aa16.89■□□□□ 0.29
CPNE6-208ENST00000558795 MCRS1Q96EZ8 462 aa16.89■□□□□ 0.29
CPNE6-208ENST00000558795 GDE1Q9NZC3 331 aa16.89■□□□□ 0.29
CPNE6-208ENST00000558795 SMG5Q9UPR3 1016 aaKnown RBP16.89■□□□□ 0.29
CPNE6-208ENST00000558795 GDAQ9Y2T3 454 aa16.89■□□□□ 0.29
CPNE6-208ENST00000558795 CDY1Q9Y6F8 540 aa16.89■□□□□ 0.29
CPNE6-208ENST00000558795 NOTCH4Q99466 2003 aa16.88■□□□□ 0.29
CPNE6-208ENST00000558795 TTLL13PA6NNM8 815 aa16.88■□□□□ 0.29
CPNE6-208ENST00000558795 TRAPPC3O43617 180 aa16.88■□□□□ 0.29
CPNE6-208ENST00000558795 ECI2O75521 394 aa16.88■□□□□ 0.29
CPNE6-208ENST00000558795 B3GAT3O94766 335 aa16.88■□□□□ 0.29
CPNE6-208ENST00000558795 PRKCBP05771 671 aa16.88■□□□□ 0.29
CPNE6-208ENST00000558795 FGFR3P22607 806 aa16.88■□□□□ 0.29
CPNE6-208ENST00000558795 TARSP26639 723 aaKnown RBP16.88■□□□□ 0.29
CPNE6-208ENST00000558795 BECN1Q14457 450 aa16.88■□□□□ 0.29
CPNE6-208ENST00000558795 NAB2Q15742 525 aa16.88■□□□□ 0.29
CPNE6-208ENST00000558795 ZBTB44Q8NCP5 570 aa16.88■□□□□ 0.29
CPNE6-208ENST00000558795 CLDN23Q96B33 292 aa16.88■□□□□ 0.29
CPNE6-208ENST00000558795 CXCL16Q9H2A7 254 aa16.88■□□□□ 0.29
CPNE6-208ENST00000558795 CDV3Q9UKY7 258 aaKnown RBP16.88■□□□□ 0.29
CPNE6-208ENST00000558795 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.88■□□□□ 0.29
CPNE6-208ENST00000558795 TMEM189-UBE2V1I3L0A0 370 aa16.87■□□□□ 0.29
CPNE6-208ENST00000558795 ACKR2O00590 384 aa16.87■□□□□ 0.29
CPNE6-208ENST00000558795 CTDNEP1O95476 244 aa16.87■□□□□ 0.29
CPNE6-208ENST00000558795 RHOP08100 348 aa16.87■□□□□ 0.29
CPNE6-208ENST00000558795 RPS9P46781 194 aaKnown RBP16.87■□□□□ 0.29
CPNE6-208ENST00000558795 HMGN5P82970 282 aaKnown RBP16.87■□□□□ 0.29
CPNE6-208ENST00000558795 LMNB2Q03252 620 aa16.87■□□□□ 0.29
CPNE6-208ENST00000558795 TSSK4Q6SA08 328 aa16.87■□□□□ 0.29
CPNE6-208ENST00000558795 ANKS3Q6ZW76 656 aa16.87■□□□□ 0.29
CPNE6-208ENST00000558795 NSUN7Q8NE18 718 aaKnown RBP16.87■□□□□ 0.29
CPNE6-208ENST00000558795 DEPTORQ8TB45 409 aa16.87■□□□□ 0.29
CPNE6-208ENST00000558795 TNFRSF25Q93038 417 aa16.87■□□□□ 0.29
CPNE6-208ENST00000558795 EPC1Q9H2F5 836 aa16.87■□□□□ 0.29
CPNE6-208ENST00000558795 HEBP1Q9NRV9 189 aa16.87■□□□□ 0.29
CPNE6-208ENST00000558795 USP18Q9UMW8 372 aa16.87■□□□□ 0.29
CPNE6-208ENST00000558795 BACE2Q9Y5Z0 518 aa16.87■□□□□ 0.29
CPNE6-208ENST00000558795 PRR5-ARHGAP8B1AHC4 643 aa16.86■□□□□ 0.29
CPNE6-208ENST00000558795 TBC1D4O60343 1298 aa16.86■□□□□ 0.29
CPNE6-208ENST00000558795 LRG1P02750 347 aa16.86■□□□□ 0.29
CPNE6-208ENST00000558795 PTPN2P17706 415 aa16.86■□□□□ 0.29
CPNE6-208ENST00000558795 ELF1P32519 619 aa16.86■□□□□ 0.29
CPNE6-208ENST00000558795 ARHGAP8P85298 464 aa16.86■□□□□ 0.29
CPNE6-208ENST00000558795 ADCY1Q08828 1119 aa16.86■□□□□ 0.29
CPNE6-208ENST00000558795 ST3GAL1Q11201 340 aa16.86■□□□□ 0.29
CPNE6-208ENST00000558795 CUL4AQ13619 759 aa16.86■□□□□ 0.29
CPNE6-208ENST00000558795 DCAF4L1Q3SXM0 396 aa16.86■□□□□ 0.29
CPNE6-208ENST00000558795 GLRA4Q5JXX5 417 aa16.86■□□□□ 0.29
CPNE6-208ENST00000558795 APBB1IPQ7Z5R6 666 aaPredicted RBP16.86■□□□□ 0.29
CPNE6-208ENST00000558795 UROC1Q96N76 676 aa16.86■□□□□ 0.29
CPNE6-208ENST00000558795 NACC1Q96RE7 527 aa16.86■□□□□ 0.29
CPNE6-208ENST00000558795 TUFT1Q9NNX1 390 aa16.86■□□□□ 0.29
CPNE6-208ENST00000558795 GMEB2Q9UKD1 530 aa16.86■□□□□ 0.29
CPNE6-208ENST00000558795 USP20Q9Y2K6 914 aa16.86■□□□□ 0.29
CPNE6-208ENST00000558795 ARHGEF35A5YM69 484 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 PRRG1O14668 218 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 LILRB5O75023 590 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 SPATA31C1P0DKV0 1188 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 TKTP29401 623 aaKnown RBP16.85■□□□□ 0.29
CPNE6-208ENST00000558795 NAMPTP43490 491 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 CLCNKBP51801 687 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 ATXN1P54253 815 aaKnown RBP16.85■□□□□ 0.29
CPNE6-208ENST00000558795 TRIM29Q14134 588 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 PPP2R5AQ15172 486 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 SLC5A9Q2M3M2 681 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 EEF1DP3Q658K8 133 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 TANGO2Q6ICL3 276 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 CATSPER3Q86XQ3 398 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 BSNDQ8WZ55 320 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 NELL1Q92832 810 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 DNASE1L2Q92874 299 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 ELSPBP1Q96BH3 223 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 DDX27Q96GQ7 796 aaKnown RBP16.85■□□□□ 0.29
CPNE6-208ENST00000558795 CNTNAP3BQ96NU0 1288 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 MTMR9Q96QG7 549 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 FAM126AQ9BYI3 521 aaPredicted RBP16.85■□□□□ 0.29
CPNE6-208ENST00000558795 CNTNAP3Q9BZ76 1288 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 PLA2G2FQ9BZM2 168 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 CCDC113Q9H0I3 377 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 BRD9Q9H8M2 597 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 AVENQ9NQS1 362 aaPredicted RBP16.85■□□□□ 0.29
CPNE6-208ENST00000558795 PRMT8Q9NR22 394 aaPredicted RBP16.85■□□□□ 0.29
CPNE6-208ENST00000558795 DAXXQ9UER7 740 aaPredicted RBP16.85■□□□□ 0.29
CPNE6-208ENST00000558795 NDRG2Q9UN36 371 aaKnown RBP16.85■□□□□ 0.29
CPNE6-208ENST00000558795 KIF3AQ9Y496 699 aa16.85■□□□□ 0.29
CPNE6-208ENST00000558795 FRYLO94915 3013 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms