RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 XIRP2A4UGR9 3374 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 GOLGA8IPA6NC78 632 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 GOLGA8JA6NMD2 632 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 PRPF40AO75400 957 aaKnown RBP13.44□□□□□ -0.26
SMAD3-205ENST00000558428 TADA2AO75478 443 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 RHOBTB3O94955 611 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 LDHAP00338 332 aaKnown RBP13.44□□□□□ -0.26
SMAD3-205ENST00000558428 SOX4Q06945 474 aaPredicted RBP13.44□□□□□ -0.26
SMAD3-205ENST00000558428 SPAG1Q07617 926 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 SMC1AQ14683 1233 aaKnown RBP13.44□□□□□ -0.26
SMAD3-205ENST00000558428 KCNB1Q14721 858 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 BMT2Q1RMZ1 405 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 HS2ST1Q7LGA3 356 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 CD302Q8IX05 232 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 ZSWIM2Q8NEG5 633 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 C18orf25Q96B23 403 aaPredicted RBP13.44□□□□□ -0.26
SMAD3-205ENST00000558428 UROC1Q96N76 676 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 FAM213AQ9BRX8 229 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 VN1R3Q9BXE9 311 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 ZBP1Q9H171 429 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 IGFLR1Q9H665 355 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 PRDM6Q9NQX0 595 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 HOOK1Q9UJC3 728 aaKnown RBP13.44□□□□□ -0.26
SMAD3-205ENST00000558428 ADAM28Q9UKQ2 775 aa13.44□□□□□ -0.26
SMAD3-205ENST00000558428 HIDE1A8MVS5 230 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 TULP1O00294 542 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-205ENST00000558428 KIAA0391O15091 583 aaKnown RBP13.43□□□□□ -0.26
SMAD3-205ENST00000558428 CLIC2O15247 247 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 XPOTO43592 962 aaKnown RBP13.43□□□□□ -0.26
SMAD3-205ENST00000558428 EXTL3O43909 919 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 KIF4AO95239 1232 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 CXCL14O95715 111 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 SOD2P04179 222 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 ADRB2P07550 413 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 CTSAP10619 480 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 NRIP1P48552 1158 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 CLCNKBP51801 687 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 HYAL1Q12794 435 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 KNOP1Q1ED39 458 aaKnown RBP13.43□□□□□ -0.26
SMAD3-205ENST00000558428 FUT10Q6P4F1 479 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 CRELD2Q6UXH1 353 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-205ENST00000558428 CLEC17AQ6ZS10 378 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 RBM23Q86U06 439 aaKnown RBP13.43□□□□□ -0.26
SMAD3-205ENST00000558428 GPD1LQ8N335 351 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 AUTS2Q8WXX7 1259 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 HERC2P3Q9BVR0 1158 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 TLE6Q9H808 572 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 AGPAT3Q9NRZ7 376 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 TUBGCP4Q9UGJ1 667 aa13.43□□□□□ -0.26
SMAD3-205ENST00000558428 UBQLN1Q9UMX0 589 aaKnown RBP13.43□□□□□ -0.26
SMAD3-205ENST00000558428 SF3B1O75533 1304 aaKnown RBP eCLIP13.42□□□□□ -0.265e-6■■■■■ 142.6
SMAD3-205ENST00000558428 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-205ENST00000558428 C2orf71A6NGG8 1288 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 PODXLO00592 558 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 PER2O15055 1255 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 TGFB1I1O43294 461 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 B3GAT3O94766 335 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 KIF20AO95235 890 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 SMC2O95347 1197 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 URODP06132 367 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 GTF2F1P35269 517 aaKnown RBP eCLIP13.42□□□□□ -0.26
SMAD3-205ENST00000558428 SNRPFP62306 86 aaKnown RBP13.42□□□□□ -0.26
SMAD3-205ENST00000558428 POU5F1Q01860 360 aaKnown RBP13.42□□□□□ -0.26
SMAD3-205ENST00000558428 TMEM132DQ14C87 1099 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 UPP1Q16831 310 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 JADE1Q6IE81 842 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 DCLRE1AQ6PJP8 1040 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 EP400NLQ6ZTU2 488 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 TAS1R1Q7RTX1 841 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 BRSK2Q8IWQ3 736 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 RNF168Q8IYW5 571 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-205ENST00000558428 MRPL43Q8N983 215 aaKnown RBP13.42□□□□□ -0.26
SMAD3-205ENST00000558428 ERCC4Q92889 916 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-205ENST00000558428 SMARCE1Q969G3 411 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 DDX27Q96GQ7 796 aaKnown RBP13.42□□□□□ -0.26
SMAD3-205ENST00000558428 GBP4Q96PP9 640 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 TSPAN18Q96SJ8 248 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 GPR62Q9BZJ7 368 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 ASB7Q9H672 318 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 RMND1Q9NWS8 449 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 RBAKQ9NYW8 714 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-205ENST00000558428 HSPBP1Q9NZL4 362 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 THEGQ9P2T0 379 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 VWA8A3KMH1 1905 aa13.42□□□□□ -0.26
SMAD3-205ENST00000558428 TMEM189-UBE2V1I3L0A0 370 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 C2CD2LO14523 706 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 NCK2O43639 380 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 IL18RAPO95256 599 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 EFEMP2O95967 443 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 NFICP08651 508 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 RPL9P32969 192 aaKnown RBP13.41□□□□□ -0.26
SMAD3-205ENST00000558428 GLUD2P49448 558 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 CYP2J2P51589 502 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 ELAVL2Q12926 359 aaKnown RBP13.41□□□□□ -0.26
SMAD3-205ENST00000558428 PTPN14Q15678 1187 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 ZBTB6Q15916 424 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 DUSP6Q16828 381 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 USP41Q3LFD5 358 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 KIAA1841Q6NSI8 718 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 ELOA2Q8IYF1 753 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms