RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 AVENQ9NQS1 362 aaPredicted RBP5.76□□□□□ -1.49
SPG11-208ENST00000558155 SH3GLB2Q9NR46 395 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 KLK14Q9P0G3 267 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 RABGEF1Q9UJ41 708 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 PCDHGA10Q9Y5H3 936 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 KMT2BQ9UMN6 2715 aaPredicted RBP5.76□□□□□ -1.49
SPG11-208ENST00000558155 DMDP11532 3685 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 F5P12259 2224 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 CHURC1-FNTBB4DL54 471 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 MARCH6O60337 910 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 GDF9O60383 454 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 TSPAN1O60635 241 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 MICAL2O94851 1124 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 THP07101 528 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 RHOP08100 348 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 HMGB1P09429 215 aaKnown RBP5.75□□□□□ -1.49
SPG11-208ENST00000558155 CHRNB1P11230 501 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 PSMC3P17980 439 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 AKAP5P24588 427 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 ELF1P32519 619 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 FNTBP49356 437 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 MLLT6P55198 1093 aaPredicted RBP5.75□□□□□ -1.49
SPG11-208ENST00000558155 TUSC3Q13454 348 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 LRRC32Q14392 662 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 KRT32Q14532 448 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 TSGA10IPQ3SY00 556 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 AASDHQ4L235 1098 aaPredicted RBP5.75□□□□□ -1.49
SPG11-208ENST00000558155 XKR9Q5GH70 373 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 CYP4A22Q5TCH4 519 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 SLC27A1Q6PCB7 646 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 C1orf228Q6PIY5 440 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 MOXD1Q6UVY6 613 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 LONP2Q86WA8 852 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 C4orf19Q8IY42 314 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 SPEM1Q8N4L4 309 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 ANKK1Q8NFD2 765 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 ING5Q8WYH8 240 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 LOXL4Q96JB6 756 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 FAM20AQ96MK3 541 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 TCEANC2Q96MN5 208 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 MTRQ99707 1265 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 ESYT1Q9BSJ8 1104 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 ZNF334Q9HCZ1 680 aaPredicted RBP5.75□□□□□ -1.49
SPG11-208ENST00000558155 ANO2Q9NQ90 1003 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 HCFC1R1Q9NWW0 138 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 DDX25Q9UHL0 483 aaKnown RBP5.75□□□□□ -1.49
SPG11-208ENST00000558155 RALYQ9UKM9 306 aaKnown RBP5.75□□□□□ -1.49
SPG11-208ENST00000558155 ZMYM2Q9UBW7 1377 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 NOTCH4Q99466 2003 aa5.75□□□□□ -1.49
SPG11-208ENST00000558155 CNOT1A5YKK6 2376 aaKnown RBP5.74□□□□□ -1.49
SPG11-208ENST00000558155 SDK1Q7Z5N4 2213 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 A0A1B0GUA9 196 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 SHISA7A6NL88 538 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 EML1O00423 815 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 TM4SF5O14894 197 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 ZNF263O14978 683 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 AXIN1O15169 862 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 ADAM12O43184 909 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 TRAPPC3O43617 180 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 NPTXRO95502 500 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 LRG1P02750 347 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 ZNF806P0C7X5 589 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 ARF4P18085 180 aaPredicted RBP5.74□□□□□ -1.49
SPG11-208ENST00000558155 GDI1P31150 447 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 YWHABP31946 246 aaKnown RBP5.74□□□□□ -1.49
SPG11-208ENST00000558155 SATB1Q01826 763 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 PPP2R5CQ13362 524 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 EMC2Q15006 297 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 ACAP1Q15027 740 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 EPHA7Q15375 998 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 FAM78AQ5JUQ0 283 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 DGKKQ5KSL6 1271 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 HEATR6Q6AI08 1181 aaKnown RBP5.74□□□□□ -1.49
SPG11-208ENST00000558155 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.74□□□□□ -1.49
SPG11-208ENST00000558155 ANKS3Q6ZW76 656 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 MAP4K3Q8IVH8 894 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 YAF2Q8IY57 180 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 ELMOD1Q8N336 334 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 FAM160A2Q8N612 972 aaPredicted RBP5.74□□□□□ -1.49
SPG11-208ENST00000558155 ZNF461Q8TAF7 563 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 ETNPPLQ8TBG4 499 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 CSGALNACT1Q8TDX6 532 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 E2F7Q96AV8 911 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 MSANTD3Q96H12 275 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 SLC26A6Q9BXS9 759 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 RNF26Q9BY78 433 aaPredicted RBP5.74□□□□□ -1.49
SPG11-208ENST00000558155 NFKBIZQ9BYH8 718 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 GPR88Q9GZN0 384 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 ARRDC1-AS1Q9H2J1 176 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 NXF3Q9H4D5 531 aaKnown RBP5.74□□□□□ -1.49
SPG11-208ENST00000558155 C8orf33Q9H7E9 229 aaPredicted RBP5.74□□□□□ -1.49
SPG11-208ENST00000558155 ZSWIM4Q9H7M6 989 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 VPS54Q9P1Q0 977 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 MTRRQ9UBK8 725 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 PCDHA4Q9UN74 947 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 BACE2Q9Y5Z0 518 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 CDY1Q9Y6F8 540 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 PIAS3Q9Y6X2 628 aa5.74□□□□□ -1.49
SPG11-208ENST00000558155 COL4A3Q01955 1670 aa5.73□□□□□ -1.49
SPG11-208ENST00000558155 ARHGEF37A1IGU5 675 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms