RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 PLEKHA5Q9HAU0 1116 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 MARCH5Q9NX47 278 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 CNTN3Q9P232 1028 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 CHD7Q9P2D1 2997 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 UBE4BO95155 1302 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 C2orf71A6NGG8 1288 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 HIDE1A8MVS5 230 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 LACTBL1A8MY62 500 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 F8W810 466 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 ABLIM1O14639 778 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 FSCN2O14926 492 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 TRAPPC3O43617 180 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 PPP1R37O75864 691 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 SMC2O95347 1197 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 PRR29P0C7W0 189 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 CYP2J2P51589 502 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 TFF2Q03403 129 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 FAM160A1Q05DH4 1040 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 PSMD2Q13200 908 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 CAMK1Q14012 370 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 TMEM132DQ14C87 1099 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 DUSP6Q16828 381 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 SLC10A6Q3KNW5 377 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 USP41Q3LFD5 358 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 ZBTB41Q5SVQ8 909 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 SLC39A4Q6P5W5 647 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 ELMSAN1Q6PJG2 1045 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 DCLRE1AQ6PJP8 1040 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 GLIS3Q8NEA6 775 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 ATXN2LQ8WWM7 1075 aaKnown RBP9.76□□□□□ -0.85
SPG11-207ENST00000558138 RIN2Q8WYP3 895 aaPredicted RBP9.76□□□□□ -0.85
SPG11-207ENST00000558138 C18orf25Q96B23 403 aaPredicted RBP9.76□□□□□ -0.85
SPG11-207ENST00000558138 PABPC5Q96DU9 382 aaKnown RBP9.76□□□□□ -0.85
SPG11-207ENST00000558138 DDX27Q96GQ7 796 aaKnown RBP9.76□□□□□ -0.85
SPG11-207ENST00000558138 PPP1R10Q96QC0 940 aaKnown RBP9.76□□□□□ -0.85
SPG11-207ENST00000558138 PAAF1Q9BRP4 392 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 HAPLN2Q9GZV7 340 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 CXCL16Q9H2A7 254 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 RMND1Q9NWS8 449 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 RBAKQ9NYW8 714 aaPredicted RBP9.76□□□□□ -0.85
SPG11-207ENST00000558138 TUBGCP4Q9UGJ1 667 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 BARX2Q9UMQ3 279 aaPredicted RBP9.76□□□□□ -0.85
SPG11-207ENST00000558138 UBQLN1Q9UMX0 589 aaKnown RBP9.76□□□□□ -0.85
SPG11-207ENST00000558138 FAM50BQ9Y247 325 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 CDH23Q9H251 3354 aa9.76□□□□□ -0.85
SPG11-207ENST00000558138 CLIC2O15247 247 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 LINC01565O15544 149 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 IL18RAPO95256 599 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 ADH1AP07327 375 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 KCNE1P15382 129 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 GARTP22102 1010 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 TFAMQ00059 246 aaKnown RBP9.75□□□□□ -0.85
SPG11-207ENST00000558138 CREMQ03060 361 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 PTPN14Q15678 1187 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 ENOX2Q16206 610 aaKnown RBP9.75□□□□□ -0.85
SPG11-207ENST00000558138 FAM171A1Q5VUB5 890 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 JADE1Q6IE81 842 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 DSTYKQ6XUX3 929 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 PPFIBP1Q86W92 1011 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 GPD1LQ8N335 351 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 EFHBQ8N7U6 833 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 MRPL43Q8N983 215 aaKnown RBP9.75□□□□□ -0.85
SPG11-207ENST00000558138 RDH13Q8NBN7 331 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 CASP10Q92851 521 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 KCNN1Q92952 543 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 B3GALT6Q96L58 329 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 ZMAT2Q96NC0 199 aaKnown RBP9.75□□□□□ -0.85
SPG11-207ENST00000558138 IPO9Q96P70 1041 aaKnown RBP9.75□□□□□ -0.85
SPG11-207ENST00000558138 CBWD1Q9BRT8 395 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 TTPALQ9BTX7 342 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 APOL5Q9BWW9 433 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 CPSF3Q9UKF6 684 aaKnown RBP9.75□□□□□ -0.85
SPG11-207ENST00000558138 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.75□□□□□ -0.85
SPG11-207ENST00000558138 ATG2AQ2TAZ0 1938 aa9.75□□□□□ -0.85
SPG11-207ENST00000558138 TRIP11Q15643 1979 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 FAM237AA0A1B0GTK4 181 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 TTC26A0AVF1 554 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 ZNF233A6NK53 670 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 GOLGA6L22H0YM25 854 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 I3L4J1 428 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 KIAA0391O15091 583 aaKnown RBP9.74□□□□□ -0.85
SPG11-207ENST00000558138 CALUO43852 315 aaPredicted RBP9.74□□□□□ -0.85
SPG11-207ENST00000558138 EXTL3O43909 919 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 EXOC3O60645 756 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 CLASP2O75122 1294 aaKnown RBP9.74□□□□□ -0.85
SPG11-207ENST00000558138 PRPF40AO75400 957 aaKnown RBP9.74□□□□□ -0.85
SPG11-207ENST00000558138 NFICP08651 508 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 KRT19P08727 400 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 TMEM191BP0C7N4 346 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 RPL9P32969 192 aaKnown RBP9.74□□□□□ -0.85
SPG11-207ENST00000558138 BRCC3P46736 316 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 KCNQ1P51787 676 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 SOX4Q06945 474 aaPredicted RBP9.74□□□□□ -0.85
SPG11-207ENST00000558138 PNOCQ13519 176 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 UPP1Q16831 310 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 KNOP1Q1ED39 458 aaKnown RBP9.74□□□□□ -0.85
SPG11-207ENST00000558138 XKR4Q5GH76 650 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 TJAP1Q5JTD0 557 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 PTCRAQ6ISU1 281 aaPredicted RBP9.74□□□□□ -0.85
SPG11-207ENST00000558138 PDXDC1Q6P996 788 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms