RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 RAG1P15918 1043 aa18.22■□□□□ 0.51
SNX1-203ENST00000558040 PON1P27169 355 aa18.22■□□□□ 0.51
SNX1-203ENST00000558040 PIK3CAP42336 1068 aa18.22■□□□□ 0.51
SNX1-203ENST00000558040 KLK7P49862 253 aa18.22■□□□□ 0.51
SNX1-203ENST00000558040 TBX2Q13207 712 aaPredicted RBP18.22■□□□□ 0.51
SNX1-203ENST00000558040 GPNMBQ14956 572 aa18.22■□□□□ 0.51
SNX1-203ENST00000558040 TDRD10Q5VZ19 366 aaKnown RBP18.22■□□□□ 0.51
SNX1-203ENST00000558040 ECHDC2Q86YB7 292 aa18.22■□□□□ 0.51
SNX1-203ENST00000558040 EFCAB13Q8IY85 973 aa18.22■□□□□ 0.51
SNX1-203ENST00000558040 CCDC150Q8NCX0 1101 aa18.22■□□□□ 0.51
SNX1-203ENST00000558040 EHBP1Q8NDI1 1231 aa18.22■□□□□ 0.51
SNX1-203ENST00000558040 OR5B17Q8NGF7 314 aa18.22■□□□□ 0.51
SNX1-203ENST00000558040 KIF12Q96FN5 646 aa18.22■□□□□ 0.51
SNX1-203ENST00000558040 MTMR12Q9C0I1 747 aa18.22■□□□□ 0.51
SNX1-203ENST00000558040 FAM207AQ9NSI2 230 aaPredicted RBP18.22■□□□□ 0.51
SNX1-203ENST00000558040 RNF216Q9NWF9 866 aaPredicted RBP18.22■□□□□ 0.51
SNX1-203ENST00000558040 PRKAG2Q9UGJ0 569 aa18.22■□□□□ 0.51
SNX1-203ENST00000558040 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.22■□□□□ 0.51
SNX1-203ENST00000558040 CITO14578 2027 aa18.22■□□□□ 0.51
SNX1-203ENST00000558040 ANK1P16157 1881 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 A0A1W2PQJ5 194 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 C9IYK1 514 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 MEFVO15553 781 aaPredicted RBP18.21■□□□□ 0.51
SNX1-203ENST00000558040 ZC3H11AO75152 810 aaKnown RBP eCLIP18.21■□□□□ 0.51
SNX1-203ENST00000558040 EOMESO95936 686 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 SLC9A1P19634 815 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 RFX1P22670 979 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 XKR4Q5GH76 650 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 TRIM65Q6PJ69 517 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 ALKAL1Q6UXT8 129 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 TRAPPC11Q7Z392 1133 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 CNGA4Q8IV77 575 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 TMEM199Q8N511 208 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 ZNF397Q8NF99 534 aaPredicted RBP18.21■□□□□ 0.51
SNX1-203ENST00000558040 TAS1R2Q8TE23 839 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 RPS6KC1Q96S38 1066 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 EDEM3Q9BZQ6 932 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 IMPG2Q9BZV3 1241 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 RNF39Q9H2S5 420 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 RAB20Q9NX57 234 aa18.21■□□□□ 0.51
SNX1-203ENST00000558040 R3HCC1Q9Y3T6 440 aaKnown RBP18.21■□□□□ 0.51
SNX1-203ENST00000558040 TRIM43BA6NCK2 446 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 AKR1B15C9JRZ8 316 aaPredicted RBP18.2■□□□□ 0.5
SNX1-203ENST00000558040 HLA-DRAP01903 254 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 GYPCP04921 128 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 KCNE1P15382 129 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 TRPC3Q13507 836 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 WDR44Q5JSH3 913 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 CNKSR3Q6P9H4 555 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 CACNA2D4Q7Z3S7 1137 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 DEFB128Q7Z7B8 93 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 RNF169Q8NCN4 708 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 BEST2Q8NFU1 509 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 TRIM43Q96BQ3 446 aaPredicted RBP18.2■□□□□ 0.5
SNX1-203ENST00000558040 HTATIP2Q9BUP3 242 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 RSAD1Q9HA92 442 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 KLK14Q9P0G3 267 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 CEP72Q9P209 647 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 FBXL5Q9UKA1 691 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 ITGA11Q9UKX5 1188 aa18.2■□□□□ 0.5
SNX1-203ENST00000558040 UBQLN1Q9UMX0 589 aaKnown RBP18.2■□□□□ 0.5
SNX1-203ENST00000558040 PFKMP08237 780 aa18.19■□□□□ 0.5
SNX1-203ENST00000558040 FAM189BP81408 668 aa18.19■□□□□ 0.5
SNX1-203ENST00000558040 NCOA4Q13772 614 aa18.19■□□□□ 0.5
SNX1-203ENST00000558040 KLHDC7AQ5VTJ3 777 aa18.19■□□□□ 0.5
SNX1-203ENST00000558040 MFSD5Q6N075 450 aa18.19■□□□□ 0.5
SNX1-203ENST00000558040 CCDC186Q7Z3E2 898 aa18.19■□□□□ 0.5
SNX1-203ENST00000558040 RTN4RL1Q86UN2 441 aaPredicted RBP18.19■□□□□ 0.5
SNX1-203ENST00000558040 RPUSD2Q8IZ73 545 aaKnown RBP18.19■□□□□ 0.5
SNX1-203ENST00000558040 LMO3Q8TAP4 145 aa18.19■□□□□ 0.5
SNX1-203ENST00000558040 CPLX3Q8WVH0 158 aa18.19■□□□□ 0.5
SNX1-203ENST00000558040 LINC01599Q8WXQ3 324 aa18.19■□□□□ 0.5
SNX1-203ENST00000558040 ABHD8Q96I13 439 aa18.19■□□□□ 0.5
SNX1-203ENST00000558040 FAM81BQ96LP2 452 aa18.19■□□□□ 0.5
SNX1-203ENST00000558040 NT5C1BQ96P26 610 aa18.19■□□□□ 0.5
SNX1-203ENST00000558040 TTYH3Q9C0H2 523 aa18.19■□□□□ 0.5
SNX1-203ENST00000558040 ELAC1Q9H777 363 aaKnown RBP18.19■□□□□ 0.5
SNX1-203ENST00000558040 SLC38A7Q9NVC3 462 aa18.19■□□□□ 0.5
SNX1-203ENST00000558040 APEX2Q9UBZ4 518 aa18.19■□□□□ 0.5
SNX1-203ENST00000558040 CAPN11Q9UMQ6 739 aa18.19■□□□□ 0.5
SNX1-203ENST00000558040 LUC7L2Q9Y383 392 aaKnown RBP18.19■□□□□ 0.5
SNX1-203ENST00000558040 SMIM28A0A1B0GU29 152 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 ENPP3O14638 875 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 MFAP3LO75121 409 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 CLSTN1O94985 981 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 VNN1O95497 513 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 ACTN1P12814 892 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 UCHL3P15374 230 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 ATF7P17544 494 aaPredicted RBP18.18■□□□□ 0.5
SNX1-203ENST00000558040 CYP3A5P20815 502 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 IBSPP21815 317 aaPredicted RBP18.18■□□□□ 0.5
SNX1-203ENST00000558040 CASP14P31944 242 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 MLH1P40692 756 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 IKBKEQ14164 716 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 TSR1Q2NL82 804 aaKnown RBP18.18■□□□□ 0.5
SNX1-203ENST00000558040 AGMOQ6ZNB7 445 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 ZNF598Q86UK7 904 aaKnown RBP18.18■□□□□ 0.5
SNX1-203ENST00000558040 TAF4BQ92750 862 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 SEMA4DQ92854 862 aa18.18■□□□□ 0.5
SNX1-203ENST00000558040 LPPQ93052 612 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms