RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 BICDL2A1A5D9 508 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 ARHGEF37A1IGU5 675 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 LACTBL1A8MY62 500 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 NRP1O14786 923 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 C1RP00736 705 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 ITGB1P05556 798 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 LRPAP1P30533 357 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 ACOT2P49753 483 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 AFF1P51825 1210 aaKnown RBP14.86□□□□□ -0.03
SHMT2-234ENST00000557703 AP3M2P53677 418 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 TIGD5Q53EQ6 642 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 PDXDC1Q6P996 788 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 ADSSL1Q8N142 457 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 BEST2Q8NFU1 509 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 SYAP1Q96A49 352 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-234ENST00000557703 CDX2Q99626 313 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-234ENST00000557703 FAM213AQ9BRX8 229 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 MKNK1Q9BUB5 465 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 PRDM12Q9H4Q4 367 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 RBAKQ9NYW8 714 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-234ENST00000557703 FRMD4BQ9Y2L6 1034 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 IRAK3Q9Y616 596 aa14.86□□□□□ -0.03
SHMT2-234ENST00000557703 EXOC3O60645 756 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 LPXNO60711 386 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 PRKCSHP14314 528 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-234ENST00000557703 TNFSF9P41273 254 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 PRCPP42785 496 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 OR1G1P47890 313 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 SLC11A1P49279 550 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 MCCD1P59942 119 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-234ENST00000557703 FKBP3Q00688 224 aaKnown RBP14.85□□□□□ -0.03
SHMT2-234ENST00000557703 CREMQ03060 361 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 TMEM132DQ14C87 1099 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 SNRNP35Q16560 246 aaKnown RBP14.85□□□□□ -0.03
SHMT2-234ENST00000557703 UPP1Q16831 310 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 SPATA1Q5VX52 437 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 MLKLQ8NB16 471 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 KIF12Q96FN5 646 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 TLR9Q9NR96 1032 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 DNAJB4Q9UDY4 337 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 DACH1Q9UI36 760 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 MAN1B1Q9UKM7 699 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 ADAM28Q9UKQ2 775 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 STXBP5LQ9Y2K9 1186 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 CDH23Q9H251 3354 aa14.85□□□□□ -0.03
SHMT2-234ENST00000557703 TISP43B9A030 160 aa14.84□□□□□ -0.03
SHMT2-234ENST00000557703 IKBKBO14920 756 aa14.84□□□□□ -0.03
SHMT2-234ENST00000557703 TADA2AO75478 443 aa14.84□□□□□ -0.03
SHMT2-234ENST00000557703 NR3C1P04150 777 aa14.84□□□□□ -0.03
SHMT2-234ENST00000557703 CCNE1P24864 410 aa14.84□□□□□ -0.03
SHMT2-234ENST00000557703 PSMD6Q15008 389 aa14.84□□□□□ -0.03
SHMT2-234ENST00000557703 SKOR2Q2VWA4 1001 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-234ENST00000557703 ZCWPW2Q504Y3 356 aa14.84□□□□□ -0.03
SHMT2-234ENST00000557703 RBM43Q6ZSC3 357 aaKnown RBP14.84□□□□□ -0.03
SHMT2-234ENST00000557703 POF1BQ8WVV4 589 aa14.84□□□□□ -0.03
SHMT2-234ENST00000557703 MFSD14AQ96MC6 490 aa14.84□□□□□ -0.03
SHMT2-234ENST00000557703 ZMAT2Q96NC0 199 aaKnown RBP14.84□□□□□ -0.03
SHMT2-234ENST00000557703 GUCD1Q96NT3 240 aa14.84□□□□□ -0.03
SHMT2-234ENST00000557703 FNBP1Q96RU3 617 aa14.84□□□□□ -0.03
SHMT2-234ENST00000557703 CDCA3Q99618 268 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-234ENST00000557703 PCIF1Q9H4Z3 704 aa14.84□□□□□ -0.03
SHMT2-234ENST00000557703 MTUS1Q9ULD2 1270 aa14.84□□□□□ -0.03
SHMT2-234ENST00000557703 SF3B1O75533 1304 aaKnown RBP eCLIP14.84□□□□□ -0.035e-8■■■■■ 37.4
SHMT2-234ENST00000557703 PRRC2BQ5JSZ5 2229 aaKnown RBP14.84□□□□□ -0.03
SHMT2-234ENST00000557703 CETN3O15182 167 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 FGFR1OPO95684 399 aaKnown RBP14.83□□□□□ -0.04
SHMT2-234ENST00000557703 EFEMP2O95967 443 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 SOD2P04179 222 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 FOSL2P15408 326 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 PNPLA4P41247 253 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 CLDN10P78369 228 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 ADAM9Q13443 819 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 CAMK4Q16566 473 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 DUOXA2Q1HG44 320 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 USP41Q3LFD5 358 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 INTS8Q75QN2 995 aaKnown RBP14.83□□□□□ -0.04
SHMT2-234ENST00000557703 Q7L0L9 218 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 WDR49Q8IV35 697 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 RNF168Q8IYW5 571 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-234ENST00000557703 GPT2Q8TD30 523 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 TMC2Q8TDI7 906 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 SAAL1Q96ER3 474 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 ANKRD36BP1Q96IX9 119 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 OXCT2Q9BYC2 517 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-234ENST00000557703 CERS4Q9HA82 394 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.83□□□□□ -0.04
SHMT2-234ENST00000557703 ITGA11Q9UKX5 1188 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 MTCH2Q9Y6C9 303 aa14.83□□□□□ -0.04
SHMT2-234ENST00000557703 MYO7AQ13402 2215 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 EPOPA6NHQ4 379 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 FSCN2O14926 492 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 CLIC2O15247 247 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 GRM6O15303 877 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 SLC16A3O15427 465 aaKnown RBP14.82□□□□□ -0.04
SHMT2-234ENST00000557703 MEFVO15553 781 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-234ENST00000557703 B3GAT3O94766 335 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 LETM1O95202 739 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-234ENST00000557703 GNA14O95837 355 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 CTSAP10619 480 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 NR2F2P24468 414 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms