RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 PRPF31Q8WWY3 499 aaKnown RBP20.65■□□□□ 0.9
FOXN3-214ENST00000557258 ATG4AQ8WYN0 398 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 COPS5Q92905 334 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 C11orf70Q9BRQ4 267 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 SPATC1LQ9H0A9 340 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 DHX33Q9H6R0 707 aaKnown RBP20.65■□□□□ 0.9
FOXN3-214ENST00000557258 CSADQ9Y600 493 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 CSDE1O75534 798 aaKnown RBP20.64■□□□□ 0.9
FOXN3-214ENST00000557258 STAT5BP51692 787 aa20.64■□□□□ 0.9
FOXN3-214ENST00000557258 IRX3P78415 501 aaPredicted RBP20.64■□□□□ 0.9
FOXN3-214ENST00000557258 USP37Q86T82 979 aa20.64■□□□□ 0.9
FOXN3-214ENST00000557258 FAM107BQ9H098 131 aa20.64■□□□□ 0.9
FOXN3-214ENST00000557258 CD58P19256 250 aa20.64■□□□□ 0.89
FOXN3-214ENST00000557258 CLEC16AQ2KHT3 1053 aa20.64■□□□□ 0.89
FOXN3-214ENST00000557258 ZACNQ401N2 412 aa20.64■□□□□ 0.89
FOXN3-214ENST00000557258 SEL1L2Q5TEA6 688 aa20.64■□□□□ 0.89
FOXN3-214ENST00000557258 ACAD10Q6JQN1 1059 aa20.64■□□□□ 0.89
FOXN3-214ENST00000557258 CCDC137Q6PK04 289 aaKnown RBP20.64■□□□□ 0.89
FOXN3-214ENST00000557258 BCAS4Q8TDM0 211 aa20.64■□□□□ 0.89
FOXN3-214ENST00000557258 FMO2Q99518 471 aa20.64■□□□□ 0.89
FOXN3-214ENST00000557258 GTF3C4Q9UKN8 822 aa20.64■□□□□ 0.89
FOXN3-214ENST00000557258 PCDHB4Q9Y5E5 795 aa20.64■□□□□ 0.89
FOXN3-214ENST00000557258 C4BPAP04003 597 aaKnown RBP20.63■□□□□ 0.89
FOXN3-214ENST00000557258 CYP1A2P05177 515 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 SCP2P22307 547 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 MAPK4P31152 587 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 CCDC105Q8IYK2 499 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 ERP44Q9BS26 406 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 HERPUD2Q9BSE4 406 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 KLHL11Q9NVR0 708 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 TTC7AQ9ULT0 858 aaPredicted RBP20.63■□□□□ 0.89
FOXN3-214ENST00000557258 NUB1Q9Y5A7 615 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 H0YGN5 161 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 MYO1FO00160 1098 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 PMM2O15305 246 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 ECM2O94769 699 aaPredicted RBP20.63■□□□□ 0.89
FOXN3-214ENST00000557258 RARAP10276 462 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 NR1D1P20393 614 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 TRIP13Q15645 432 aaPredicted RBP20.63■□□□□ 0.89
FOXN3-214ENST00000557258 Q3C1V9 767 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 C15orf39Q6ZRI6 1047 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 CD101Q93033 1021 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 HEMGNQ9BXL5 484 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 NFS1Q9Y697 457 aa20.63■□□□□ 0.89
FOXN3-214ENST00000557258 SHBGP04278 402 aa20.62■□□□□ 0.89
FOXN3-214ENST00000557258 SSR1P43307 286 aaKnown RBP20.62■□□□□ 0.89
FOXN3-214ENST00000557258 PSMD6Q15008 389 aa20.62■□□□□ 0.89
FOXN3-214ENST00000557258 FBXO16Q8IX29 292 aaPredicted RBP20.62■□□□□ 0.89
FOXN3-214ENST00000557258 CHST13Q8NET6 341 aa20.62■□□□□ 0.89
FOXN3-214ENST00000557258 ATP6V1G3Q96LB4 118 aa20.62■□□□□ 0.89
FOXN3-214ENST00000557258 USTQ9Y2C2 406 aa20.62■□□□□ 0.89
FOXN3-214ENST00000557258 SHOX2O60902 331 aaPredicted RBP20.62■□□□□ 0.89
FOXN3-214ENST00000557258 CST3P01034 146 aaPredicted RBP20.62■□□□□ 0.89
FOXN3-214ENST00000557258 ARL2P36404 184 aa20.62■□□□□ 0.89
FOXN3-214ENST00000557258 RPL21P46778 160 aaKnown RBP20.62■□□□□ 0.89
FOXN3-214ENST00000557258 GCNT1Q02742 428 aa20.62■□□□□ 0.89
FOXN3-214ENST00000557258 GJC2Q5T442 439 aaPredicted RBP20.62■□□□□ 0.89
FOXN3-214ENST00000557258 SULF1Q8IWU6 871 aa20.62■□□□□ 0.89
FOXN3-214ENST00000557258 MROH7Q68CQ1 1323 aa20.62■□□□□ 0.89
FOXN3-214ENST00000557258 MYPNQ86TC9 1320 aa20.62■□□□□ 0.89
FOXN3-214ENST00000557258 GOLGA6L10A6NI86 522 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 MIF4GDA9UHW6 222 aaKnown RBP20.61■□□□□ 0.89
FOXN3-214ENST00000557258 MYZAPP0CAP1 466 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 SEC24CP53992 1094 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 DUPD1Q68J44 220 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 SCARA5Q6ZMJ2 495 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 DNERQ8NFT8 737 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 LRRC45Q96CN5 670 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 CEP89Q96ST8 783 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 NAP1L3Q99457 506 aaPredicted RBP20.61■□□□□ 0.89
FOXN3-214ENST00000557258 MTMR12Q9C0I1 747 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 ASCC2Q9H1I8 757 aaPredicted RBP20.61■□□□□ 0.89
FOXN3-214ENST00000557258 DNAJC17Q9NVM6 304 aaKnown RBP20.61■□□□□ 0.89
FOXN3-214ENST00000557258 PHF2O75151 1096 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 NAMPTP43490 491 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 VPS41P49754 854 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 HADHBP55084 474 aaKnown RBP20.61■□□□□ 0.89
FOXN3-214ENST00000557258 RTP1P59025 263 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 NOL9Q5SY16 702 aaKnown RBP20.61■□□□□ 0.89
FOXN3-214ENST00000557258 CCDC25Q86WR0 208 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 MCOLN2Q8IZK6 566 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 RNF149Q8NC42 400 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 CWC15Q9P013 229 aaKnown RBP20.61■□□□□ 0.89
FOXN3-214ENST00000557258 EIF3HO15372 352 aaKnown RBP eCLIP20.61■□□□□ 0.89
FOXN3-214ENST00000557258 STAM2O75886 525 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 ATG7O95352 703 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 UNGP13051 313 aaPredicted RBP20.61■□□□□ 0.89
FOXN3-214ENST00000557258 GTF2H1P32780 548 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 NSFP46459 744 aaKnown RBP20.61■□□□□ 0.89
FOXN3-214ENST00000557258 NOP14P78316 857 aaKnown RBP20.61■□□□□ 0.89
FOXN3-214ENST00000557258 ODF2Q5BJF6 829 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 SLC13A5Q86YT5 568 aaPredicted RBP20.61■□□□□ 0.89
FOXN3-214ENST00000557258 C10orf67Q8IYJ2 551 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 RAB17Q9H0T7 212 aa20.61■□□□□ 0.89
FOXN3-214ENST00000557258 BHMG1C9JSJ3 638 aaPredicted RBP20.6■□□□□ 0.89
FOXN3-214ENST00000557258 KIAA0391O15091 583 aaKnown RBP20.6■□□□□ 0.89
FOXN3-214ENST00000557258 FGFR4P22455 802 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 TMOD1P28289 359 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 GNA15P30679 374 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 PTGIRP43119 386 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms