RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 ZNF570Q96NI8 536 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 ADAM33Q9BZ11 813 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 DCLK3Q9C098 648 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 FBXO28Q9NVF7 368 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 KLHL14Q9P2G3 628 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 ZNFX1Q9P2E3 1918 aaKnown RBP12.14□□□□□ -0.47
SRP54-213ENST00000556994 RALAP11233 206 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 RARRES1P49788 294 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 PTK6Q13882 451 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 TMEM63BQ5T3F8 832 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 ASRGL1Q7L266 308 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 GBP7Q8N8V2 638 aaPredicted RBP12.14□□□□□ -0.47
SRP54-213ENST00000556994 CCHCR1Q8TD31 782 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 SPOCK2Q92563 424 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 VTI1AQ96AJ9 217 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 PITPNM3Q9BZ71 974 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 ETNK1Q9HBU6 452 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 KCNH7Q9NS40 1196 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 ADAM22Q9P0K1 906 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 MROH7Q68CQ1 1323 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 GSTTP1A0A1W2PQM5 241 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 RASA4BC9J798 803 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 RASA4O43374 803 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 TAC1P20366 129 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 MUTP22033 750 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 RNASELQ05823 741 aaKnown RBP12.14□□□□□ -0.47
SRP54-213ENST00000556994 TMED2Q15363 201 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 KRT39Q6A163 491 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 SLC17A8Q8NDX2 589 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 IL31RAQ8NI17 732 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 C7orf43Q8WVR3 580 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 SLCO2A1Q92959 643 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 MRRFQ96E11 262 aaKnown RBP12.14□□□□□ -0.47
SRP54-213ENST00000556994 FAXDC2Q96IV6 333 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 MXRA8Q9BRK3 442 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 TRAIPQ9BWF2 469 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 PLVAPQ9BX97 442 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 ARHGEF10LQ9HCE6 1279 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 NKIRAS1Q9NYS0 192 aa12.14□□□□□ -0.47
SRP54-213ENST00000556994 GAS8O95995 478 aa12.13□□□□□ -0.47
SRP54-213ENST00000556994 P4HBP07237 508 aaKnown RBP12.13□□□□□ -0.47
SRP54-213ENST00000556994 CCND1P24385 295 aa12.13□□□□□ -0.47
SRP54-213ENST00000556994 PDE6BP35913 854 aa12.13□□□□□ -0.47
SRP54-213ENST00000556994 WDR4P57081 412 aaKnown RBP12.13□□□□□ -0.47
SRP54-213ENST00000556994 GTF2BQ00403 316 aa12.13□□□□□ -0.47
SRP54-213ENST00000556994 SPP2Q13103 211 aa12.13□□□□□ -0.47
SRP54-213ENST00000556994 CLEC16AQ2KHT3 1053 aa12.13□□□□□ -0.47
SRP54-213ENST00000556994 FAM102BQ5T8I3 360 aa12.13□□□□□ -0.47
SRP54-213ENST00000556994 CAPN12Q6ZSI9 719 aa12.13□□□□□ -0.47
SRP54-213ENST00000556994 ARHGEF18Q6ZSZ5 1173 aa12.13□□□□□ -0.47
SRP54-213ENST00000556994 PAXIP1Q6ZW49 1069 aaPredicted RBP12.13□□□□□ -0.47
SRP54-213ENST00000556994 BZW1Q7L1Q6 419 aaKnown RBP12.13□□□□□ -0.47
SRP54-213ENST00000556994 ATL2Q8NHH9 583 aa12.13□□□□□ -0.47
SRP54-213ENST00000556994 PARD3BQ8TEW8 1205 aa12.13□□□□□ -0.47
SRP54-213ENST00000556994 IFT74Q96LB3 600 aa12.13□□□□□ -0.47
SRP54-213ENST00000556994 MAGEB18Q96M61 343 aa12.13□□□□□ -0.47
SRP54-213ENST00000556994 TMEM237Q96Q45 408 aa12.13□□□□□ -0.47
SRP54-213ENST00000556994 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.13□□□□□ -0.47
SRP54-213ENST00000556994 SLC24A3Q9HC58 644 aa12.13□□□□□ -0.47
SRP54-213ENST00000556994 DNAJC3Q13217 504 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 MTFR1Q15390 333 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 UGCGQ16739 394 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 IZUMO3Q5VZ72 239 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 PLA2G4FQ68DD2 849 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 PODNQ7Z5L7 613 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 ANKS1BQ7Z6G8 1248 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 UTP4Q969X6 686 aaKnown RBP12.12□□□□□ -0.47
SRP54-213ENST00000556994 PRMT6Q96LA8 375 aaPredicted RBP12.12□□□□□ -0.47
SRP54-213ENST00000556994 AGBL1Q96MI9 1066 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 NT5C1BQ96P26 610 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 MYLK2Q9H1R3 596 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 KIF9Q9HAQ2 790 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 SLCO1B3Q9NPD5 702 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 RAB20Q9NX57 234 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 COL20A1Q9P218 1284 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 MRPL11Q9Y3B7 192 aaKnown RBP12.12□□□□□ -0.47
SRP54-213ENST00000556994 LY75O60449 1722 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 LRRC37AA6NMS7 1700 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 TCP10L2B9ZVM9 353 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 DHX15O43143 795 aaKnown RBP12.12□□□□□ -0.47
SRP54-213ENST00000556994 CDH16O75309 829 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 YWHABP31946 246 aaKnown RBP12.12□□□□□ -0.47
SRP54-213ENST00000556994 SSR1P43307 286 aaKnown RBP12.12□□□□□ -0.47
SRP54-213ENST00000556994 SOX10P56693 466 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 SLC8A3P57103 927 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 DACT2Q5SW24 774 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 LMBRD2Q68DH5 695 aaPredicted RBP12.12□□□□□ -0.47
SRP54-213ENST00000556994 ZNF365Q70YC5 407 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 GSTA5Q7RTV2 222 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 LDHDQ86WU2 507 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 C12orf56Q8IXR9 622 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 MCOLN2Q8IZK6 566 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 MAB21L3Q8N8X9 362 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 FBXL13Q8NEE6 735 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 KIFAP3Q92845 792 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 DDX27Q96GQ7 796 aaKnown RBP12.12□□□□□ -0.47
SRP54-213ENST00000556994 KLHL11Q9NVR0 708 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 USP21Q9UK80 565 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 USTQ9Y2C2 406 aa12.12□□□□□ -0.47
SRP54-213ENST00000556994 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms