RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 ASB2Q96Q27 587 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 PAAF1Q9BRP4 392 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 HERC2P3Q9BVR0 1158 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 VN1R3Q9BXE9 311 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 FGFBP2Q9BYJ0 223 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 IKZF4Q9H2S9 585 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 UBE2ZQ9H832 354 aaPredicted RBP11.64□□□□□ -0.55
LINC00239-201ENST00000556973 CLDND1Q9NY35 253 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 PCDHGC5Q9Y5F6 944 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 REV3LO60673 3130 aa11.64□□□□□ -0.55
LINC00239-201ENST00000556973 ANK1P16157 1881 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 UBE4BO95155 1302 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 LACTBL1A8MY62 500 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 TISP43B9A030 160 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 F8W810 466 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 TMEM189-UBE2V1I3L0A0 370 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 KIAA0391O15091 583 aaKnown RBP11.63□□□□□ -0.55
LINC00239-201ENST00000556973 XPOTO43592 962 aaKnown RBP11.63□□□□□ -0.55
LINC00239-201ENST00000556973 LILRB3O75022 631 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 CA8P35219 290 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 ACOT2P49753 483 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 SNRPFP62306 86 aaKnown RBP11.63□□□□□ -0.55
LINC00239-201ENST00000556973 ELAVL2Q12926 359 aaKnown RBP11.63□□□□□ -0.55
LINC00239-201ENST00000556973 ZBTB6Q15916 424 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 ENOX2Q16206 610 aaKnown RBP11.63□□□□□ -0.55
LINC00239-201ENST00000556973 USP41Q3LFD5 358 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 LEXMQ3ZCV2 418 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 ZBTB41Q5SVQ8 909 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 KIAA0319Q5VV43 1072 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 KIAA1841Q6NSI8 718 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 FUT10Q6P4F1 479 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 CRELD2Q6UXH1 353 aaPredicted RBP11.63□□□□□ -0.55
LINC00239-201ENST00000556973 TMEM184AQ6ZMB5 413 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 EP400NLQ6ZTU2 488 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 TAS1R1Q7RTX1 841 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 GPR65Q8IYL9 337 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 GLIS3Q8NEA6 775 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 SCFD1Q8WVM8 642 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 CCDC47Q96A33 483 aaKnown RBP11.63□□□□□ -0.55
LINC00239-201ENST00000556973 FAM212AQ96EL1 285 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 EMILIN2Q9BXX0 1053 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 GPR62Q9BZJ7 368 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 ASB7Q9H672 318 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 SLC39A2Q9NP94 309 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 CHST7Q9NS84 486 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 CACNG4Q9UBN1 327 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 DERAQ9Y315 318 aa11.63□□□□□ -0.55
LINC00239-201ENST00000556973 SF3B1O75533 1304 aaKnown RBP eCLIP11.62□□□□□ -0.55
LINC00239-201ENST00000556973 LINC01565O15544 149 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 TRAPPC3O43617 180 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 B3GAT3O94766 335 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 KIF4AO95239 1232 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 RPN1P04843 607 aaKnown RBP11.62□□□□□ -0.55
LINC00239-201ENST00000556973 URODP06132 367 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 SRGAP2BP0DMP2 458 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 CYP3A5P20815 502 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 KCNA5P22460 613 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 HOXD13P35453 343 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 LTBRP36941 435 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 GLUD2P49448 558 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 DSG1Q02413 1049 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 TFF2Q03403 129 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 FAM160A1Q05DH4 1040 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 SOX4Q06945 474 aaPredicted RBP11.62□□□□□ -0.55
LINC00239-201ENST00000556973 DPYDQ12882 1025 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 SNW1Q13573 536 aaKnown RBP11.62□□□□□ -0.55
LINC00239-201ENST00000556973 KCNC3Q14003 757 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 PTPN14Q15678 1187 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 PUS10Q3MIT2 529 aaKnown RBP11.62□□□□□ -0.55
LINC00239-201ENST00000556973 TJAP1Q5JTD0 557 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 ARMCX5Q6P1M9 558 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 PPFIBP1Q86W92 1011 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 ENGASEQ8NFI3 743 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 AUTS2Q8WXX7 1259 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 KIF12Q96FN5 646 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 TIGD1Q96MW7 591 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 KLHL5Q96PQ7 755 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 FAM213AQ9BRX8 229 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 GOLGA2P5Q9HBQ8 144 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 EXOC1Q9NV70 894 aa11.62□□□□□ -0.55
LINC00239-201ENST00000556973 UBQLN1Q9UMX0 589 aaKnown RBP11.62□□□□□ -0.55
LINC00239-201ENST00000556973 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.61□□□□□ -0.55
LINC00239-201ENST00000556973 PODXLO00592 558 aa11.61□□□□□ -0.55
LINC00239-201ENST00000556973 EXTL3O43909 919 aa11.61□□□□□ -0.55
LINC00239-201ENST00000556973 CLASP2O75122 1294 aaKnown RBP11.61□□□□□ -0.55
LINC00239-201ENST00000556973 RHOBTB3O94955 611 aa11.61□□□□□ -0.55
LINC00239-201ENST00000556973 IL18RAPO95256 599 aa11.61□□□□□ -0.55
LINC00239-201ENST00000556973 PRR29P0C7W0 189 aa11.61□□□□□ -0.55
LINC00239-201ENST00000556973 KLRC2P26717 231 aa11.61□□□□□ -0.55
LINC00239-201ENST00000556973 NDUFV1P49821 464 aa11.61□□□□□ -0.55
LINC00239-201ENST00000556973 CREMQ03060 361 aa11.61□□□□□ -0.55
LINC00239-201ENST00000556973 SPAG1Q07617 926 aa11.61□□□□□ -0.55
LINC00239-201ENST00000556973 STK4Q13043 487 aa11.61□□□□□ -0.55
LINC00239-201ENST00000556973 KNOP1Q1ED39 458 aaKnown RBP11.61□□□□□ -0.55
LINC00239-201ENST00000556973 BMT2Q1RMZ1 405 aa11.61□□□□□ -0.55
LINC00239-201ENST00000556973 FAM171A1Q5VUB5 890 aa11.61□□□□□ -0.55
LINC00239-201ENST00000556973 SPATA1Q5VX52 437 aa11.61□□□□□ -0.55
LINC00239-201ENST00000556973 PDXDC1Q6P996 788 aa11.61□□□□□ -0.55
LINC00239-201ENST00000556973 CD300LGQ6UXG3 332 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms