RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 XKR4Q5GH76 650 aa10.43□□□□□ -0.74
MARK3-211ENST00000556744 EEF1DP3Q658K8 133 aa10.43□□□□□ -0.74
MARK3-211ENST00000556744 DDX53Q86TM3 631 aaKnown RBP10.43□□□□□ -0.74
MARK3-211ENST00000556744 TMEM173Q86WV6 379 aaPredicted RBP10.43□□□□□ -0.74
MARK3-211ENST00000556744 HACE1Q8IYU2 909 aa10.43□□□□□ -0.74
MARK3-211ENST00000556744 RNF168Q8IYW5 571 aaPredicted RBP10.43□□□□□ -0.74
MARK3-211ENST00000556744 MRPL43Q8N983 215 aaKnown RBP10.43□□□□□ -0.74
MARK3-211ENST00000556744 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.43□□□□□ -0.74
MARK3-211ENST00000556744 URGCPQ8TCY9 931 aa10.43□□□□□ -0.74
MARK3-211ENST00000556744 PPP2R3CQ969Q6 453 aa10.43□□□□□ -0.74
MARK3-211ENST00000556744 CDK5RAP3Q96JB5 506 aa10.43□□□□□ -0.74
MARK3-211ENST00000556744 CLIC6Q96NY7 704 aa10.43□□□□□ -0.74
MARK3-211ENST00000556744 FIZ1Q96SL8 496 aa10.43□□□□□ -0.74
MARK3-211ENST00000556744 GAD1Q99259 594 aa10.43□□□□□ -0.74
MARK3-211ENST00000556744 PLIN2Q99541 437 aa10.43□□□□□ -0.74
MARK3-211ENST00000556744 CDCA3Q99618 268 aaPredicted RBP10.43□□□□□ -0.74
MARK3-211ENST00000556744 ACO2Q99798 780 aaKnown RBP10.43□□□□□ -0.74
MARK3-211ENST00000556744 KIFC3Q9BVG8 833 aa10.43□□□□□ -0.74
MARK3-211ENST00000556744 VN1R3Q9BXE9 311 aa10.43□□□□□ -0.74
MARK3-211ENST00000556744 NXF3Q9H4D5 531 aaKnown RBP10.43□□□□□ -0.74
MARK3-211ENST00000556744 KMT5AQ9NQR1 393 aa10.43□□□□□ -0.74
MARK3-211ENST00000556744 DNAJB4Q9UDY4 337 aa10.43□□□□□ -0.74
MARK3-211ENST00000556744 STK17AQ9UEE5 414 aa10.43□□□□□ -0.74
MARK3-211ENST00000556744 HES2Q9Y543 173 aa10.43□□□□□ -0.74
MARK3-211ENST00000556744 TDRD15B5MCY1 1934 aaKnown RBP10.43□□□□□ -0.74
MARK3-211ENST00000556744 SFI1A8K8P3 1242 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 ERVH48-1M5A8F1 160 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 DLL1O00548 723 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 NPTXRO95502 500 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 F13A1P00488 732 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 PBX3P40426 434 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 SEC13P55735 322 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 ZRSR1Q15695 479 aaKnown RBP10.42□□□□□ -0.74
MARK3-211ENST00000556744 NAB2Q15742 525 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 DUSP6Q16828 381 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 DCAF4L1Q3SXM0 396 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 ATF7IP2Q5U623 682 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 ALKAL1Q6UXT8 129 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 ZPBP2Q6X784 338 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 ADGRD2Q7Z7M1 963 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 CDR2LQ86X02 465 aaPredicted RBP10.42□□□□□ -0.74
MARK3-211ENST00000556744 GPR65Q8IYL9 337 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 BCL7CQ8WUZ0 217 aaPredicted RBP10.42□□□□□ -0.74
MARK3-211ENST00000556744 LARP4BQ92615 738 aaKnown RBP10.42□□□□□ -0.74
MARK3-211ENST00000556744 MSLNLQ96KJ4 702 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 ZFP42Q96MM3 310 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 ZNF396Q96N95 335 aaPredicted RBP10.42□□□□□ -0.74
MARK3-211ENST00000556744 REEP2Q9BRK0 252 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 TRIM6Q9C030 488 aaPredicted RBP10.42□□□□□ -0.74
MARK3-211ENST00000556744 ST6GALNAC4Q9H4F1 302 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 LARSQ9P2J5 1176 aaKnown RBP10.42□□□□□ -0.74
MARK3-211ENST00000556744 INPP5FQ9Y2H2 1132 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 USP20Q9Y2K6 914 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 PCDHGA11Q9Y5H2 935 aa10.42□□□□□ -0.74
MARK3-211ENST00000556744 TRIP11Q15643 1979 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 TCF20Q9UGU0 1960 aaKnown RBP10.41□□□□□ -0.74
MARK3-211ENST00000556744 NPHP3-ACAD11A0A0J9YXS1 232 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 C2orf71A6NGG8 1288 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 CCDC169A6NNP5 214 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 HIDE1A8MVS5 230 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 NT5C1B-RDH14C9J2C7 533 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 H0YCG3 227 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 PTGESO14684 152 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 NRP1O14786 923 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 SPTLC2O15270 562 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 SLC16A4O15374 487 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 ZC3H11AO75152 810 aaKnown RBP eCLIP10.41□□□□□ -0.74
MARK3-211ENST00000556744 GLP2RO95838 553 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 POMCP01189 267 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 PIGRP01833 764 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 CTSAP10619 480 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 FSHRP23945 695 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 AKAP5P24588 427 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 GTF2F1P35269 517 aaKnown RBP eCLIP10.41□□□□□ -0.74
MARK3-211ENST00000556744 MLH1P40692 756 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 SCNN1GP51170 649 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 KCNQ1P51787 676 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 SMTNP53814 917 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 RNASELQ05823 741 aaKnown RBP10.41□□□□□ -0.74
MARK3-211ENST00000556744 DLX2Q07687 328 aaPredicted RBP10.41□□□□□ -0.74
MARK3-211ENST00000556744 GRIK3Q13003 919 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 COASYQ13057 564 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 PKP1Q13835 747 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 SPECC1Q5M775 1068 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 AXDND1Q5T1B0 1012 aaPredicted RBP10.41□□□□□ -0.74
MARK3-211ENST00000556744 GPBP1Q86WP2 473 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 DNAJC19Q96DA6 116 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 TMEM169Q96HH4 297 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 TCF25Q9BQ70 676 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 ADPGKQ9BRR6 497 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 STRA6Q9BX79 667 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 MRPL4Q9BYD3 311 aaKnown RBP10.41□□□□□ -0.74
MARK3-211ENST00000556744 ZBP1Q9H171 429 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 MARCH5Q9NX47 278 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 CLEC1BQ9P126 229 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 CCDC39Q9UFE4 941 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 RCOR1Q9UKL0 485 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 FAN1Q9Y2M0 1017 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 ZDHHC9Q9Y397 364 aa10.41□□□□□ -0.74
MARK3-211ENST00000556744 PCDHGC5Q9Y5F6 944 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms