RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 NUB1Q9Y5A7 615 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 TULP1O00294 542 aaPredicted RBP11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 PODXLO00592 558 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 CCL16O15467 120 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 CLDN3O15551 220 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 C1RP00736 705 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 C8AP07357 584 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 CFHP08603 1231 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 FSHRP23945 695 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 TKTP29401 623 aaKnown RBP11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 SLC12A3P55017 1021 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 ARPP19P56211 112 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 NOLC1Q14978 699 aaKnown RBP eCLIP11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 UPP1Q16831 310 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 GRASPQ7Z6J2 395 aaPredicted RBP11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 GPBP1Q86WP2 473 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 KCTD17Q8N5Z5 321 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 MYCT1Q8N699 235 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 ST13P5Q8NFI4 369 aaPredicted RBP11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 ATOH1Q92858 354 aaPredicted RBP11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 ZNF707Q96C28 371 aaPredicted RBP11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 DDX27Q96GQ7 796 aaKnown RBP11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 AK8Q96MA6 479 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 KCND2Q9NZV8 630 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 IGSF9Q9P2J2 1179 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 FBXW11Q9UKB1 542 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 CDY1Q9Y6F8 540 aa11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 PDCD11Q14690 1871 aaKnown RBP11.57□□□□□ -0.56
SPTLC2-205ENST00000556607 H0Y858 1186 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 H0YCG3 227 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 TMEM189-UBE2V1I3L0A0 370 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 K7ENM7 598 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 ADAM12O43184 909 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 NARSO43776 548 aaKnown RBP11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 N4BP1O75113 896 aaKnown RBP11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 XYLBO75191 536 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 TOM1L1O75674 476 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 FAM13AO94988 1023 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 BMP15O95972 392 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 FGFR3P22607 806 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 IGFBP6P24592 240 aaPredicted RBP11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 ELF1P32519 619 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 MCM4P33991 863 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 LIG4P49917 911 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 NTHL1P78549 312 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 SOX4Q06945 474 aaPredicted RBP11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 MCM6Q14566 821 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 SF3A1Q15459 793 aaKnown RBP11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 AXDND1Q5T1B0 1012 aaPredicted RBP11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 ASTLQ6HA08 431 aaPredicted RBP11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 ANKS3Q6ZW76 656 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 BRAPQ7Z569 592 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 C3orf58Q8NDZ4 430 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 TMEM161BQ8NDZ6 487 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 SLC7A14Q8TBB6 771 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 SPIRE2Q8WWL2 714 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 FAM212AQ96EL1 285 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 SNX27Q96L92 541 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 MYADMQ96S97 322 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 PHOX2BQ99453 314 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 NTPCRQ9BSD7 190 aaKnown RBP11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 PTPRHQ9HD43 1115 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 FAM86C1Q9NVL1 165 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 DUSP12Q9UNI6 340 aa11.56□□□□□ -0.56
SPTLC2-205ENST00000556607 TBCAO75347 108 aaKnown RBP11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 HNRNPA1P09651 372 aaKnown RBP eCLIP11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 MAPTP10636 758 aaKnown RBP11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 LAMP2P13473 410 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 PLCG1P19174 1290 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 PDCP20941 246 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 PROZP22891 400 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 LONP1P36776 959 aaKnown RBP11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 CEBPZQ03701 1054 aaKnown RBP11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 SPAG1Q07617 926 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 TCF15Q12870 199 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 KARSQ15046 597 aaKnown RBP11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 TMEM119Q4V9L6 283 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 ALKAL1Q6UXT8 129 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 HAUS6Q7Z4H7 955 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 SIX5Q8N196 739 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 C18orf25Q96B23 403 aaPredicted RBP11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 KIF12Q96FN5 646 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 ZMAT2Q96NC0 199 aaKnown RBP11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 REEP2Q9BRK0 252 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 RHOBTB2Q9BYZ6 727 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 IRF2BPLQ9H1B7 796 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 FOXD4L1Q9NU39 408 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 CNTN3Q9P232 1028 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 EPS15L1Q9UBC2 864 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 MTRRQ9UBK8 725 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 ODF2LQ9ULJ1 636 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 CA14Q9ULX7 337 aa11.55□□□□□ -0.56
SPTLC2-205ENST00000556607 H7C4K7 107 aa11.54□□□□□ -0.56
SPTLC2-205ENST00000556607 PRRG1O14668 218 aa11.54□□□□□ -0.56
SPTLC2-205ENST00000556607 HNRNPDLO14979 420 aaKnown RBP11.54□□□□□ -0.56
SPTLC2-205ENST00000556607 LRG1P02750 347 aa11.54□□□□□ -0.56
SPTLC2-205ENST00000556607 CXCL8P10145 99 aa11.54□□□□□ -0.56
SPTLC2-205ENST00000556607 KCNE1P15382 129 aa11.54□□□□□ -0.56
SPTLC2-205ENST00000556607 MARCKSP29966 332 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms