RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 PALMO75781 387 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 SEC24DO94855 1032 aaPredicted RBP6.62□□□□□ -1.35
TDP1-215ENST00000556498 ADCY5O95622 1261 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 TBC1D8O95759 1140 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 AGR2O95994 175 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 GLI1P08151 1106 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 CLTAP09496 248 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 IFIT2P09913 472 aaKnown RBP6.62□□□□□ -1.35
TDP1-215ENST00000556498 CKBP12277 381 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 SYT1P21579 422 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 TNFAIP3P21580 790 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 TBXAS1P24557 533 aaPredicted RBP6.62□□□□□ -1.35
TDP1-215ENST00000556498 TKTP29401 623 aaKnown RBP6.62□□□□□ -1.35
TDP1-215ENST00000556498 EIF4A3P38919 411 aaKnown RBP6.62□□□□□ -1.35
TDP1-215ENST00000556498 BPIFB4P59827 614 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 VBP1P61758 197 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 GNAI1P63096 354 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 EXOSC10Q01780 885 aaKnown RBP6.62□□□□□ -1.35
TDP1-215ENST00000556498 ACTN3Q08043 901 aaPredicted RBP6.62□□□□□ -1.35
TDP1-215ENST00000556498 PRKG1Q13976 671 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 POU4F3Q15319 338 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 PLEKHG4Q58EX7 1191 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 HSP90AA5PQ58FG0 334 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 KRBOX4Q5JUW0 171 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 DACT2Q5SW24 774 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 AADACL4Q5VUY2 407 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 SCARA3Q6AZY7 606 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 OR7E24Q6IFN5 339 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 BORAQ6PGQ7 559 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 CCDC81Q6ZN84 652 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 ZNF704Q6ZNC4 412 aaPredicted RBP6.62□□□□□ -1.35
TDP1-215ENST00000556498 FAM196AQ6ZSG2 479 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 BEND4Q6ZU67 534 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 RSRC2Q7L4I2 434 aaKnown RBP6.62□□□□□ -1.35
TDP1-215ENST00000556498 ZER1Q7Z7L7 766 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 PNMA8AQ86V59 439 aaPredicted RBP6.62□□□□□ -1.35
TDP1-215ENST00000556498 EXOC3L1Q86VI1 746 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 HACE1Q8IYU2 909 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 KCT2Q8NC54 265 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 FBXO30Q8TB52 745 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 FBXO41Q8TF61 875 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 BCL7CQ8WUZ0 217 aaPredicted RBP6.62□□□□□ -1.35
TDP1-215ENST00000556498 CNDP1Q96KN2 507 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 FAM167AQ96KS9 214 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 C7orf25Q9BPX7 421 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 GPATCH1Q9BRR8 931 aaKnown RBP6.62□□□□□ -1.35
TDP1-215ENST00000556498 HERPUD2Q9BSE4 406 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 KIFC3Q9BVG8 833 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 ADNPQ9H2P0 1102 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 UCK1Q9HA47 277 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 CBX8Q9HC52 389 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 SDHAF3Q9NRP4 125 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 USP40Q9NVE5 1235 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 HPF1Q9NWY4 346 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 KCNK4Q9NYG8 393 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.62□□□□□ -1.35
TDP1-215ENST00000556498 NOP53Q9NZM5 478 aaKnown RBP6.62□□□□□ -1.35
TDP1-215ENST00000556498 ADAMTS1Q9UHI8 967 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 ANAPC5Q9UJX4 755 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 CLEC4AQ9UMR7 237 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 C15orf41Q9Y2V0 281 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 TSC22D4Q9Y3Q8 395 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 AFG3L2Q9Y4W6 797 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 SNX9Q9Y5X1 595 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 KAT6BQ8WYB5 2073 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 FRMD3A2A2Y4 597 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 CCDC151A5D8V7 595 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 SNTNA6NMZ2 147 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 KPNA5O15131 536 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 HOXC11O43248 304 aaPredicted RBP6.61□□□□□ -1.35
TDP1-215ENST00000556498 ADAM11O75078 769 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 USP2O75604 605 aaPredicted RBP6.61□□□□□ -1.35
TDP1-215ENST00000556498 GUCA1CO95843 209 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 PF4P02776 101 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 GSTP1P09211 210 aaKnown RBP6.61□□□□□ -1.35
TDP1-215ENST00000556498 TOP1P11387 765 aaKnown RBP6.61□□□□□ -1.35
TDP1-215ENST00000556498 HSPA6P17066 643 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 CTNNA2P26232 953 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 EEF1GP26641 437 aaKnown RBP6.61□□□□□ -1.35
TDP1-215ENST00000556498 MAOBP27338 520 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 AXLP30530 894 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 PTGS2P35354 604 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 ETFBP38117 255 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 KRT6CP48668 564 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 HSPA13P48723 471 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 AARSP49588 968 aaKnown RBP eCLIP6.61□□□□□ -1.35
TDP1-215ENST00000556498 CCNG1P51959 295 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 MAP3K7CLP57077 242 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 GSDMDP57764 484 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 APOBRQ0VD83 1088 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 GALNT1Q10472 559 aaPredicted RBP6.61□□□□□ -1.35
TDP1-215ENST00000556498 CAMK2GQ13555 558 aaPredicted RBP6.61□□□□□ -1.35
TDP1-215ENST00000556498 EPHA7Q15375 998 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 NFE2Q16621 373 aaPredicted RBP6.61□□□□□ -1.35
TDP1-215ENST00000556498 ARHGAP29Q52LW3 1261 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 SETMARQ53H47 684 aaPredicted RBP6.61□□□□□ -1.35
TDP1-215ENST00000556498 FAM209AQ5JX71 171 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 FAM173BQ6P4H8 233 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 KRT27Q7Z3Y8 459 aa6.61□□□□□ -1.35
TDP1-215ENST00000556498 PODNQ7Z5L7 613 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms