RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 NT5C1B-RDH14C9J2C7 533 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 FSCN2O14926 492 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 HNRNPDLO14979 420 aaKnown RBP10.54□□□□□ -0.72
SRP54-210ENST00000556380 ZC3H11AO75152 810 aaKnown RBP eCLIP10.54□□□□□ -0.72
SRP54-210ENST00000556380 PRPF6O94906 941 aaKnown RBP10.54□□□□□ -0.72
SRP54-210ENST00000556380 GCNT3O95395 438 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 ALDH2P05091 517 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 MYL1P05976 194 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 KCNE1P15382 129 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 PPM1AP35813 382 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 ALDH7A1P49419 539 aaKnown RBP10.54□□□□□ -0.72
SRP54-210ENST00000556380 LIG4P49917 911 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 ERVFC1P60507 584 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 RNASELQ05823 741 aaKnown RBP10.54□□□□□ -0.72
SRP54-210ENST00000556380 DPYDQ12882 1025 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 GRIK3Q13003 919 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 BMT2Q1RMZ1 405 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 RALGAPA2Q2PPJ7 1873 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 SEZ6Q53EL9 994 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 FAM26FQ5R3K3 315 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 ZBTB41Q5SVQ8 909 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 THNSL1Q8IYQ7 743 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 MAFAQ8NHW3 353 aaPredicted RBP10.54□□□□□ -0.72
SRP54-210ENST00000556380 SCFD1Q8WVM8 642 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 POF1BQ8WVV4 589 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 BICD1Q96G01 975 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 SNX27Q96L92 541 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 ZMAT2Q96NC0 199 aaKnown RBP10.54□□□□□ -0.72
SRP54-210ENST00000556380 ACAP3Q96P50 834 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 PPP1R10Q96QC0 940 aaKnown RBP10.54□□□□□ -0.72
SRP54-210ENST00000556380 ACCSQ96QU6 501 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 CCDC94Q9BW85 323 aaPredicted RBP10.54□□□□□ -0.72
SRP54-210ENST00000556380 MARCH5Q9NX47 278 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 ANKFY1Q9P2R3 1169 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 CUL9Q8IWT3 2517 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 TTC26A0AVF1 554 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 F8W810 466 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 NRP1O14786 923 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 OGTO15294 1046 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 EIF3DO15371 548 aaKnown RBP eCLIP10.53□□□□□ -0.72
SRP54-210ENST00000556380 TGFB1I1O43294 461 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 THP07101 528 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 CLTAP09496 248 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 HARSP12081 509 aaKnown RBP10.53□□□□□ -0.72
SRP54-210ENST00000556380 IRS1P35568 1242 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 TNFSF9P41273 254 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 OSTNP61366 133 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 FAM160A1Q05DH4 1040 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 STK4Q13043 487 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 TUSC3Q13454 348 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 COL19A1Q14993 1142 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 ZBTB6Q15916 424 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 ENOX2Q16206 610 aaKnown RBP10.53□□□□□ -0.72
SRP54-210ENST00000556380 PTPROQ16827 1216 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 KMT5BQ4FZB7 885 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 TPRNQ4KMQ1 711 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 SLFN12LQ6IEE8 588 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 CRELD2Q6UXH1 353 aaPredicted RBP10.53□□□□□ -0.72
SRP54-210ENST00000556380 DDX53Q86TM3 631 aaKnown RBP10.53□□□□□ -0.72
SRP54-210ENST00000556380 RNF168Q8IYW5 571 aaPredicted RBP10.53□□□□□ -0.72
SRP54-210ENST00000556380 GBP3Q9H0R5 595 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 PLEKHA5Q9HAU0 1116 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 CNTN3Q9P232 1028 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 CPSF3Q9UKF6 684 aaKnown RBP10.53□□□□□ -0.72
SRP54-210ENST00000556380 FAN1Q9Y2M0 1017 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 PCDHGC5Q9Y5F6 944 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 KIAA1671Q9BY89 1806 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 NLRC5Q86WI3 1866 aa10.53□□□□□ -0.72
SRP54-210ENST00000556380 XIRP2A4UGR9 3374 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 BDP1A6H8Y1 2624 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 GOLGA6L4A6NEF3 574 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 LILRB3O75022 631 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 NR1I2O75469 434 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 GARTP22102 1010 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 IGFBP6P24592 240 aaPredicted RBP10.52□□□□□ -0.73
SRP54-210ENST00000556380 POU5F1Q01860 360 aaKnown RBP10.52□□□□□ -0.73
SRP54-210ENST00000556380 KRT17Q04695 432 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 SOX4Q06945 474 aaPredicted RBP10.52□□□□□ -0.73
SRP54-210ENST00000556380 PSMD2Q13200 908 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 POSTNQ15063 836 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 CCDC85BQ15834 202 aaPredicted RBP10.52□□□□□ -0.73
SRP54-210ENST00000556380 KYAT1Q16773 422 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 TCEAL5Q5H9L2 206 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 CD300LGQ6UXG3 332 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 ELOA2Q8IYF1 753 aaPredicted RBP10.52□□□□□ -0.73
SRP54-210ENST00000556380 KIAA0895Q8NCT3 520 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 ZSWIM2Q8NEG5 633 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 SPATA20Q8TB22 786 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 TIGD1Q96MW7 591 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 FAM193BQ96PV7 902 aaPredicted RBP10.52□□□□□ -0.73
SRP54-210ENST00000556380 PAAF1Q9BRP4 392 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 MSTO1Q9BUK6 570 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 TMEM206Q9H813 350 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 SLC39A2Q9NP94 309 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 TLR9Q9NR96 1032 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 TOPORSQ9NS56 1045 aaPredicted RBP10.52□□□□□ -0.73
SRP54-210ENST00000556380 CACNG4Q9UBN1 327 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 AGO2Q9UKV8 859 aaKnown RBP10.52□□□□□ -0.73
SRP54-210ENST00000556380 EXOC7Q9UPT5 735 aa10.52□□□□□ -0.73
SRP54-210ENST00000556380 PRG3Q9Y2Y8 225 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms