RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 INTS13Q9NVM9 706 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 RAB20Q9NX57 234 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 KANSL3Q9P2N6 904 aa9.96□□□□□ -0.82
ACTN1-218ENST00000556343 UBQLN1Q9UMX0 589 aaKnown RBP9.96□□□□□ -0.82
ACTN1-218ENST00000556343 ABHD14A-ACY1A0A1B0GW23 586 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 ENPP3O14638 875 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 RECQL4O94761 1208 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 C4BPAP04003 597 aaKnown RBP9.95□□□□□ -0.82
ACTN1-218ENST00000556343 P4HA1P13674 534 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 KCNE1P15382 129 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 CYP3A5P20815 502 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 PAX3P23760 479 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 AKAP5P24588 427 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 PIK3CAP42336 1068 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 DLG4P78352 724 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 FAM189BP81408 668 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 PPP3CAQ08209 521 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 MYO1EQ12965 1108 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 MBTPS1Q14703 1052 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 SGSM1Q2NKQ1 1148 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 ZACNQ401N2 412 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 FIGNQ5HY92 759 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 ZBTB41Q5SVQ8 909 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 SMYD5Q6GMV2 418 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 GLB1LQ6UWU2 654 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 TRAPPC11Q7Z392 1133 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 DEFB128Q7Z7B8 93 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 CNGA4Q8IV77 575 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 ABI1Q8IZP0 508 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 CEP120Q8N960 986 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 SPC24Q8NBT2 197 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 SMG8Q8ND04 991 aaKnown RBP9.95□□□□□ -0.82
ACTN1-218ENST00000556343 DPF3Q92784 378 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 SNX27Q96L92 541 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 NT5C1BQ96P26 610 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 FAM193BQ96PV7 902 aaPredicted RBP9.95□□□□□ -0.82
ACTN1-218ENST00000556343 PPP1R9BQ96SB3 815 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 POP1Q99575 1024 aaKnown RBP9.95□□□□□ -0.82
ACTN1-218ENST00000556343 DNAI2Q9GZS0 605 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 WNT8AQ9H1J5 351 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 RSAD1Q9HA92 442 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 PLCB1Q9NQ66 1216 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 ZNHIT6Q9NWK9 470 aaKnown RBP9.95□□□□□ -0.82
ACTN1-218ENST00000556343 TMEM161AQ9NX61 479 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 GCNT4Q9P109 453 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 CNTN3Q9P232 1028 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 ITGA11Q9UKX5 1188 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 LUC7L2Q9Y383 392 aaKnown RBP9.95□□□□□ -0.82
ACTN1-218ENST00000556343 COQ4Q9Y3A0 265 aa9.95□□□□□ -0.82
ACTN1-218ENST00000556343 A0A1W2PQJ5 194 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 TRIM43BA6NCK2 446 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 C9IYK1 514 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 AKR1B15C9JRZ8 316 aaPredicted RBP9.94□□□□□ -0.82
ACTN1-218ENST00000556343 HLA-DRAP01903 254 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 AMHP03971 560 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 THP07101 528 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 KRT19P08727 400 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 CCDC172P0C7W6 258 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 IBSPP21815 317 aaPredicted RBP9.94□□□□□ -0.82
ACTN1-218ENST00000556343 PON1P27169 355 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 ATICP31939 592 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 PBX1P40424 430 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 PNPLA4P41247 253 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 MFAP3P55082 362 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 YWHAEP62258 255 aaKnown RBP9.94□□□□□ -0.82
ACTN1-218ENST00000556343 NCOA4Q13772 614 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 CBWD6Q4V339 395 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 XKR4Q5GH76 650 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 CBWD3Q5JTY5 395 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 CBWD5Q5RIA9 395 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 C1orf220Q5T0J3 134 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 JADE1Q6IE81 842 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 ALKAL1Q6UXT8 129 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 ENOSF1Q7L5Y1 443 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 NPAS4Q8IUM7 802 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 TMEM192Q8IY95 271 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 PLEKHO2Q8TD55 490 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 TRIM43Q96BQ3 446 aaPredicted RBP9.94□□□□□ -0.82
ACTN1-218ENST00000556343 TRIM44Q96DX7 344 aaPredicted RBP9.94□□□□□ -0.82
ACTN1-218ENST00000556343 FAXDC2Q96IV6 333 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 PDLIM2Q96JY6 352 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 LBHD1Q9BQE6 289 aaPredicted RBP9.94□□□□□ -0.82
ACTN1-218ENST00000556343 CRACR2AQ9BSW2 395 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 INTS2Q9H0H0 1204 aaKnown RBP9.94□□□□□ -0.82
ACTN1-218ENST00000556343 IL23AQ9NPF7 189 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 DPP3Q9NY33 737 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 FBXL5Q9UKA1 691 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 HES2Q9Y543 173 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 NR2E3Q9Y5X4 410 aa9.94□□□□□ -0.82
ACTN1-218ENST00000556343 UMODL1Q5DID0 1318 aa9.93□□□□□ -0.82
ACTN1-218ENST00000556343 SMIM28A0A1B0GU29 152 aa9.93□□□□□ -0.82
ACTN1-218ENST00000556343 CARNS1A5YM72 827 aa9.93□□□□□ -0.82
ACTN1-218ENST00000556343 ARL5CA6NH57 179 aa9.93□□□□□ -0.82
ACTN1-218ENST00000556343 MGEA5O60502 916 aa9.93□□□□□ -0.82
ACTN1-218ENST00000556343 BAIAP3O94812 1187 aa9.93□□□□□ -0.82
ACTN1-218ENST00000556343 FGBP02675 491 aa9.93□□□□□ -0.82
ACTN1-218ENST00000556343 TBXAS1P24557 533 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-218ENST00000556343 RPL9P32969 192 aaKnown RBP9.93□□□□□ -0.82
ACTN1-218ENST00000556343 KCNJ6P48051 423 aa9.93□□□□□ -0.82
ACTN1-218ENST00000556343 ZBED6P86452 979 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms