RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 CLDN10P78369 228 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 PPP2R3AQ06190 1150 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 DSC1Q08554 894 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 HSP90AA4PQ58FG1 418 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 LMBRD2Q68DH5 695 aaPredicted RBP12.44□□□□□ -0.42
GABRB3-210ENST00000556166 CMTR2Q8IYT2 770 aaKnown RBP12.44□□□□□ -0.42
GABRB3-210ENST00000556166 ABI1Q8IZP0 508 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 AOPEPQ8N6M6 819 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 CXorf38Q8TB03 319 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 KIF12Q96FN5 646 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 BPIFA3Q9BQP9 254 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 PAAF1Q9BRP4 392 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 MKNK1Q9BUB5 465 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 PBX4Q9BYU1 374 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 ASB7Q9H672 318 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 NRDE2Q9H7Z3 1164 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 CBX8Q9HC52 389 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 DNAJB4Q9UDY4 337 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 TUBGCP4Q9UGJ1 667 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 NFE2L3Q9Y4A8 694 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 PCDHA11Q9Y5I1 949 aa12.44□□□□□ -0.42
GABRB3-210ENST00000556166 LRRIQ3A6PVS8 624 aaPredicted RBP12.43□□□□□ -0.42
GABRB3-210ENST00000556166 F8W810 466 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 THP07101 528 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 DLATP10515 647 aaKnown RBP12.43□□□□□ -0.42
GABRB3-210ENST00000556166 PBX3P40426 434 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 VAMP7P51809 220 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 BTG3Q14201 252 aaPredicted RBP12.43□□□□□ -0.42
GABRB3-210ENST00000556166 GSE1Q14687 1217 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 CDKAL1Q5VV42 579 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 CD300LGQ6UXG3 332 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 FRMD5Q7Z6J6 570 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 CD302Q8IX05 232 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 COLGALT2Q8IYK4 626 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 URGCPQ8TCY9 931 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 TMC2Q8TDI7 906 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 THAP9Q9H5L6 903 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 GOLGA2P5Q9HBQ8 144 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 KANSL3Q9P2N6 904 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 LINC01553A4QN01 128 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 CA3P07451 260 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 TRIM49P0CI25 452 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 TRIM49CP0CI26 452 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 EPB41P11171 864 aaKnown RBP12.43□□□□□ -0.42
GABRB3-210ENST00000556166 MARSP56192 900 aaKnown RBP12.43□□□□□ -0.42
GABRB3-210ENST00000556166 MYL5Q02045 173 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 PPP3CAQ08209 521 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 GRIK3Q13003 919 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 TMEM132DQ14C87 1099 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 LUZP1Q86V48 1076 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 GAS2L3Q86XJ1 694 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 RPS6KC1Q96S38 1066 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 NAT10Q9H0A0 1025 aaKnown RBP12.43□□□□□ -0.42
GABRB3-210ENST00000556166 TSPY26PQ9H489 355 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 INTS13Q9NVM9 706 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 DERAQ9Y315 318 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 C2CD2Q9Y426 696 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 CHD9Q3L8U1 2897 aa12.43□□□□□ -0.42
GABRB3-210ENST00000556166 CASTOR2A6NHX0 329 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 PPEF2O14830 753 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 IKBKBO14920 756 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 C4BPAP04003 597 aaKnown RBP12.42□□□□□ -0.42
GABRB3-210ENST00000556166 GALTP07902 379 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 ZNF18P17022 549 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 SLC11A1P49279 550 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 BCAR1P56945 870 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 TFAMQ00059 246 aaKnown RBP12.42□□□□□ -0.42
GABRB3-210ENST00000556166 RNASELQ05823 741 aaKnown RBP12.42□□□□□ -0.42
GABRB3-210ENST00000556166 BFSP1Q12934 665 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 TUSC3Q13454 348 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 LRIT3Q3SXY7 679 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 INTS8Q75QN2 995 aaKnown RBP12.42□□□□□ -0.42
GABRB3-210ENST00000556166 TRIM59Q8IWR1 403 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 LRRC43Q8N309 656 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 FIBCD1Q8N539 461 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 C1orf127Q8N9H9 656 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 BCL7CQ8WUZ0 217 aaPredicted RBP12.42□□□□□ -0.42
GABRB3-210ENST00000556166 CLP1Q92989 425 aaKnown RBP12.42□□□□□ -0.42
GABRB3-210ENST00000556166 SLC35C1Q96A29 364 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 CNOT6LQ96LI5 555 aaKnown RBP12.42□□□□□ -0.42
GABRB3-210ENST00000556166 TSPAN18Q96SJ8 248 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 CGRRF1Q99675 332 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 MTMR12Q9C0I1 747 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 NKX2-4Q9H2Z4 354 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 ARMCX3Q9UH62 379 aaPredicted RBP12.42□□□□□ -0.42
GABRB3-210ENST00000556166 SIX4Q9UIU6 781 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 TRIOBPQ9H2D6 2365 aa12.42□□□□□ -0.42
GABRB3-210ENST00000556166 A0A1W2PPC1 479 aa12.41□□□□□ -0.42
GABRB3-210ENST00000556166 NT5C1B-RDH14C9J2C7 533 aa12.41□□□□□ -0.42
GABRB3-210ENST00000556166 SOX1O00570 391 aaPredicted RBP12.41□□□□□ -0.42
GABRB3-210ENST00000556166 FGFR1OPO95684 399 aaKnown RBP12.41□□□□□ -0.42
GABRB3-210ENST00000556166 ITGB1P05556 798 aa12.41□□□□□ -0.42
GABRB3-210ENST00000556166 KRT13P13646 458 aa12.41□□□□□ -0.42
GABRB3-210ENST00000556166 TNNI1P19237 187 aa12.41□□□□□ -0.42
GABRB3-210ENST00000556166 GCLMP48507 274 aa12.41□□□□□ -0.42
GABRB3-210ENST00000556166 SMAD3P84022 425 aaKnown RBP12.41□□□□□ -0.42
GABRB3-210ENST00000556166 TAP1Q03518 808 aa12.41□□□□□ -0.42
GABRB3-210ENST00000556166 HSP90AA2PQ14568 343 aaPredicted RBP12.41□□□□□ -0.42
GABRB3-210ENST00000556166 TPD52L1Q16890 204 aaPredicted RBP12.41□□□□□ -0.42
GABRB3-210ENST00000556166 DUOXA2Q1HG44 320 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms