RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 GPR20Q99678 358 aa8.48□□□□□ -1.05
SUPT16H-204ENST00000555943 EIF2AK1Q9BQI3 630 aaKnown RBP8.48□□□□□ -1.05
SUPT16H-204ENST00000555943 POLR3CQ9BUI4 534 aaPredicted RBP8.48□□□□□ -1.05
SUPT16H-204ENST00000555943 NT5C1AQ9BXI3 368 aa8.48□□□□□ -1.05
SUPT16H-204ENST00000555943 TMPRSS13Q9BYE2 586 aa8.48□□□□□ -1.05
SUPT16H-204ENST00000555943 PANK2Q9BZ23 570 aa8.48□□□□□ -1.05
SUPT16H-204ENST00000555943 CCSER1Q9C0I3 900 aa8.48□□□□□ -1.05
SUPT16H-204ENST00000555943 SMARCAD1Q9H4L7 1026 aa8.48□□□□□ -1.05
SUPT16H-204ENST00000555943 BCAS3Q9H6U6 928 aa8.48□□□□□ -1.05
SUPT16H-204ENST00000555943 ZSWIM4Q9H7M6 989 aa8.48□□□□□ -1.05
SUPT16H-204ENST00000555943 TUFT1Q9NNX1 390 aa8.48□□□□□ -1.05
SUPT16H-204ENST00000555943 XPNPEP3Q9NQH7 507 aa8.48□□□□□ -1.05
SUPT16H-204ENST00000555943 ZNF302Q9NR11 478 aa8.48□□□□□ -1.05
SUPT16H-204ENST00000555943 GABBR1Q9UBS5 961 aa8.48□□□□□ -1.05
SUPT16H-204ENST00000555943 KDM3AQ9Y4C1 1321 aa8.48□□□□□ -1.05
SUPT16H-204ENST00000555943 LTBP2Q14767 1821 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 LCTP09848 1927 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 GSTTP1A0A1W2PQM5 241 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 MEGF11A6BM72 1044 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 FAM181BA6NEQ2 426 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 F8W735 103 aaPredicted RBP8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 TLR3O15455 904 aaKnown RBP8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 ADCY6O43306 1168 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 CILPO75339 1184 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 PGK1P00558 417 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 MMP3P08254 477 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 MYL3P08590 195 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 PFKFB1P16118 471 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 MUTP22033 750 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 RPA1P27694 616 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 SYKP43405 635 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 QARSP47897 775 aaKnown RBP8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 GJA9P57773 515 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 RTP1P59025 263 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 CTTNQ14247 550 aaKnown RBP8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 KARSQ15046 597 aaKnown RBP8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 LRRC41Q15345 812 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 HSDL1Q3SXM5 330 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 SHC4Q6S5L8 630 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 B3GNT9Q6UX72 402 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 ABHD15Q6UXT9 468 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 OTUD6AQ7L8S5 288 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 TRMT1LQ7Z2T5 733 aaKnown RBP8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 AGGF1Q8N302 714 aaeCLIP8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 PDILTQ8N807 584 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 IQUBQ8NA54 791 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 PCSK9Q8NBP7 692 aaKnown RBP8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 NACC1Q96RE7 527 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 PLIN2Q99541 437 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 NRBP2Q9NSY0 501 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 LMBRD1Q9NUN5 540 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 RGL1Q9NZL6 768 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 ZNF215Q9UL58 517 aaPredicted RBP8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 KCNH3Q9ULD8 1083 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 DNM3Q9UQ16 869 aa8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 LAMA2P24043 3122 aaKnown RBP8.47□□□□□ -1.05
SUPT16H-204ENST00000555943 POLR2DO15514 142 aaKnown RBP8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 MED24O75448 989 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 SLITRK3O94933 977 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 ALX3O95076 343 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 MBD3O95983 291 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 LGALS2P05162 132 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 PTGS1P23219 599 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 STAT6P42226 847 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 CHMP4BP1P59074 171 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 BEX3Q00994 111 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 FAM109BQ6ICB4 259 aaPredicted RBP8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 USP49Q70CQ1 688 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 Q7L0L9 218 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 PLPPR4Q7Z2D5 763 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 CATSPER3Q86XQ3 398 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 CEP57L1Q8IYX8 460 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 TMEM130Q8N3G9 435 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 SLC43A3Q8NBI5 491 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 AFAP1L1Q8TED9 768 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 DHX58Q96C10 678 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 FAM167AQ96KS9 214 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 HSD17B14Q9BPX1 270 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 LXNQ9BS40 222 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 KATNAL1Q9BW62 490 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 UPF3AQ9H1J1 476 aaKnown RBP8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 RAD18Q9NS91 495 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 DDX19AQ9NUU7 478 aaKnown RBP8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 ERAP1Q9NZ08 941 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 ATP11BQ9Y2G3 1177 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 PCDHGC5Q9Y5F6 944 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 MROH7Q68CQ1 1323 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 SYNRGQ9UMZ2 1314 aa8.46□□□□□ -1.06
SUPT16H-204ENST00000555943 IGKV6D-21A0A0A0MT36 114 aa8.45□□□□□ -1.06
SUPT16H-204ENST00000555943 KINO60870 393 aaKnown RBP8.45□□□□□ -1.06
SUPT16H-204ENST00000555943 ZNF202O95125 648 aa8.45□□□□□ -1.06
SUPT16H-204ENST00000555943 SSBP05455 408 aaKnown RBP eCLIP8.45□□□□□ -1.06
SUPT16H-204ENST00000555943 ZNF286BP0CG31 522 aa8.45□□□□□ -1.06
SUPT16H-204ENST00000555943 PLCG1P19174 1290 aa8.45□□□□□ -1.06
SUPT16H-204ENST00000555943 MARK3P27448 753 aa8.45□□□□□ -1.06
SUPT16H-204ENST00000555943 CST5P28325 142 aaPredicted RBP8.45□□□□□ -1.06
SUPT16H-204ENST00000555943 YWHABP31946 246 aaKnown RBP8.45□□□□□ -1.06
SUPT16H-204ENST00000555943 SLC26A2P50443 739 aa8.45□□□□□ -1.06
SUPT16H-204ENST00000555943 NDUFA8P51970 172 aa8.45□□□□□ -1.06
SUPT16H-204ENST00000555943 PRKCEQ02156 737 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms