RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 LRRC55Q6ZSA7 311 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 TMEM174Q8WUU8 243 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 PRIMPOLQ96LW4 560 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 INO80BQ9C086 356 aaPredicted RBP12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 RBSNQ9H1K0 784 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 HSD3B7Q9H2F3 369 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 AGPAT3Q9NRZ7 376 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 PLAGL2Q9UPG8 496 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 EXOC7Q9UPT5 735 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 GINS2Q9Y248 185 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 RWDD3Q9Y3V2 267 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 MYO10Q9HD67 2058 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 M0QZ92 97 aa12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 ABLIM1O14639 778 aa12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 B4GALT5O43286 388 aa12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 TSPAN1O60635 241 aa12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 CSDE1O75534 798 aaKnown RBP12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 SNRPFP62306 86 aaKnown RBP12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 PCBP1Q15365 356 aaKnown RBP eCLIP12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 ASTLQ6HA08 431 aaPredicted RBP12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 ZPBP2Q6X784 338 aa12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 HS2ST1Q7LGA3 356 aa12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 LUZP1Q86V48 1076 aa12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 C12orf56Q8IXR9 622 aa12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 KIAA2013Q8IYS2 634 aa12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 RNF214Q8ND24 703 aa12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 GOLGA5Q8TBA6 731 aa12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 TARS2Q9BW92 718 aaKnown RBP12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 MRPL4Q9BYD3 311 aaKnown RBP12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 CGNQ9P2M7 1197 aaKnown RBP12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 USP20Q9Y2K6 914 aa12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 NFE2L3Q9Y4A8 694 aa12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 STYXL1Q9Y6J8 313 aa12.8□□□□□ -0.36
MTHFD1-211ENST00000555709 FSD2A1L4K1 749 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 ANKRD63C9JTQ0 380 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 CALUO43852 315 aaPredicted RBP12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 NR3C1P04150 777 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 PROZP22891 400 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 SFPQP23246 707 aaKnown RBP eCLIP12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 ADSSP30520 456 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 PRPF4BQ13523 1007 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 ST3GAL2Q16842 350 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 FBXO47Q5MNV8 452 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 CDKAL1Q5VV42 579 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 SPATA1Q5VX52 437 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 TSHZ1Q6ZSZ6 1077 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 FAM228AQ86W67 206 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 SLC9A9Q8IVB4 645 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 SYCP3Q8IZU3 236 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 KREMEN2Q8NCW0 462 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 SEPT8Q92599 483 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 BICD1Q96G01 975 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 ACO2Q99798 780 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 TSG101Q99816 390 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 PLVAPQ9BX97 442 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 PTPRHQ9HD43 1115 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 AGPAT5Q9NUQ2 364 aa12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 NOC2LQ9Y3T9 749 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-211ENST00000555709 TOM1L1O75674 476 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 ERLIN2O94905 339 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 ZNF18P17022 549 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 ARF4P18085 180 aaPredicted RBP12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 GARTP22102 1010 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 FGFR4P22455 802 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 NR2F2P24468 414 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 NRIP1P48552 1158 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 LIG4P49917 911 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 CLCN5P51795 746 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 MYBPC2Q14324 1141 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 LPIN1Q14693 890 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 ATF7IP2Q5U623 682 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 UBALD2Q8IYN6 164 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 CSGALNACT2Q8N6G5 542 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 PPP2R3CQ969Q6 453 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 CBWD1Q9BRT8 395 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 HAPLN2Q9GZV7 340 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 PDZD7Q9H5P4 517 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 AGO3Q9H9G7 860 aaKnown RBP12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 DMAC2Q9NW81 257 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 TNFSF13BQ9Y275 285 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 SQORQ9Y6N5 450 aa12.78□□□□□ -0.36
MTHFD1-211ENST00000555709 FAM208BQ5VWN6 2430 aa12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 A0A0B4J269 797 aa12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 A0A1B0GUA9 196 aa12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 SMTNL1A8MU46 457 aa12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 CLIC2O15247 247 aa12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 FAM189A1O60320 539 aa12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 ITGB1P05556 798 aa12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 GHRP10912 638 aa12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 HOXA11P31270 313 aaPredicted RBP12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 RBM10P98175 930 aaKnown RBP12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 FKBP3Q00688 224 aaKnown RBP12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 MCL1Q07820 350 aa12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 COL9A2Q14055 689 aaPredicted RBP12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 EEF1DP3Q658K8 133 aa12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 ARMCX5Q6P1M9 558 aa12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 CATSPER4Q7RTX7 472 aa12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 ZBTB33Q86T24 672 aa12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 IRF2BP1Q8IU81 584 aa12.77□□□□□ -0.37
MTHFD1-211ENST00000555709 VN1R2Q8NFZ6 395 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms