RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 CCDC62Q6P9F0 684 aa26.03■■□□□ 1.76
TMEM260-207ENST00000555497 BBXQ8WY36 941 aaPredicted RBP26.03■■□□□ 1.76
TMEM260-207ENST00000555497 UMODL1Q5DID0 1318 aa26.03■■□□□ 1.76
TMEM260-207ENST00000555497 FAM189A1O60320 539 aa26.03■■□□□ 1.76
TMEM260-207ENST00000555497 SRGAP2CP0DJJ0 459 aa26.03■■□□□ 1.76
TMEM260-207ENST00000555497 LAMTOR4Q0VGL1 99 aa26.03■■□□□ 1.76
TMEM260-207ENST00000555497 HLTFQ14527 1009 aaKnown RBP eCLIP26.03■■□□□ 1.76
TMEM260-207ENST00000555497 WDR78Q5VTH9 848 aa26.03■■□□□ 1.76
TMEM260-207ENST00000555497 ZDHHC14Q8IZN3 488 aa26.03■■□□□ 1.76
TMEM260-207ENST00000555497 HSF2BPO75031 334 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 CFHP08603 1231 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 EPHX2P34913 555 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 PTENP60484 403 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 PLCB4Q15147 1175 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 IER5Q5VY09 327 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 USP50Q70EL3 339 aaPredicted RBP26.02■■□□□ 1.76
TMEM260-207ENST00000555497 ZBTB33Q86T24 672 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 EIF1ADQ8N9N8 165 aaKnown RBP26.02■■□□□ 1.76
TMEM260-207ENST00000555497 TRAPPC12Q8WVT3 735 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 FAM167AQ96KS9 214 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 SYT17Q9BSW7 474 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 PDGFCQ9NRA1 345 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 CNOT8Q9UFF9 292 aaKnown RBP26.02■■□□□ 1.76
TMEM260-207ENST00000555497 NOP56O00567 594 aaKnown RBP26.02■■□□□ 1.76
TMEM260-207ENST00000555497 DAPK3O43293 454 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 CUL1Q13616 776 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 UBL4BQ8N7F7 174 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 CCDC26Q8TAB7 109 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 ATP8B4Q8TF62 1192 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 CPA5Q8WXQ8 436 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 ARL8AQ96BM9 186 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 ZBTB10Q96DT7 871 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 FAM81BQ96LP2 452 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 NUB1Q9Y5A7 615 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 PCDHB2Q9Y5E7 798 aa26.02■■□□□ 1.76
TMEM260-207ENST00000555497 IGKV6-21A0A0C4DH24 114 aa26.01■■□□□ 1.75
TMEM260-207ENST00000555497 CLDN3O15551 220 aa26.01■■□□□ 1.75
TMEM260-207ENST00000555497 OSBPP22059 807 aa26.01■■□□□ 1.75
TMEM260-207ENST00000555497 CUL2Q13617 745 aa26.01■■□□□ 1.75
TMEM260-207ENST00000555497 MAATS1Q7Z4T9 603 aa26.01■■□□□ 1.75
TMEM260-207ENST00000555497 SPATA33Q96N06 139 aa26.01■■□□□ 1.75
TMEM260-207ENST00000555497 TRIM51Q9BSJ1 452 aa26.01■■□□□ 1.75
TMEM260-207ENST00000555497 UVRAGQ9P2Y5 699 aa26.01■■□□□ 1.75
TMEM260-207ENST00000555497 PYGMP11217 842 aa26■■□□□ 1.75
TMEM260-207ENST00000555497 CDCA2Q69YH5 1023 aaPredicted RBP26■■□□□ 1.75
TMEM260-207ENST00000555497 ZPBP2Q6X784 338 aa26■■□□□ 1.75
TMEM260-207ENST00000555497 FASTKD5Q7L8L6 764 aaKnown RBP26■■□□□ 1.75
TMEM260-207ENST00000555497 PLPPR4Q7Z2D5 763 aa26■■□□□ 1.75
TMEM260-207ENST00000555497 DHX37Q8IY37 1157 aaKnown RBP26■■□□□ 1.75
TMEM260-207ENST00000555497 RNF149Q8NC42 400 aa26■■□□□ 1.75
TMEM260-207ENST00000555497 SEC14L1Q92503 715 aa26■■□□□ 1.75
TMEM260-207ENST00000555497 L3MBTL3Q96JM7 780 aaPredicted RBP26■■□□□ 1.75
TMEM260-207ENST00000555497 ZNF668Q96K58 619 aaPredicted RBP26■■□□□ 1.75
TMEM260-207ENST00000555497 TRIM7Q9C029 511 aa26■■□□□ 1.75
TMEM260-207ENST00000555497 WNT8AQ9H1J5 351 aa26■■□□□ 1.75
TMEM260-207ENST00000555497 GJB1P08034 283 aa26■■□□□ 1.75
TMEM260-207ENST00000555497 HSPA9P38646 679 aaKnown RBP26■■□□□ 1.75
TMEM260-207ENST00000555497 C2CD6Q53TS8 623 aa26■■□□□ 1.75
TMEM260-207ENST00000555497 LLGL2Q6P1M3 1020 aa26■■□□□ 1.75
TMEM260-207ENST00000555497 KCNV1Q6PIU1 500 aa26■■□□□ 1.75
TMEM260-207ENST00000555497 PHLDB2Q86SQ0 1253 aa26■■□□□ 1.75
TMEM260-207ENST00000555497 MCOLN2Q8IZK6 566 aa26■■□□□ 1.75
TMEM260-207ENST00000555497 MPHOSPH6Q99547 160 aaKnown RBP26■■□□□ 1.75
TMEM260-207ENST00000555497 ACO2Q99798 780 aaKnown RBP26■■□□□ 1.75
TMEM260-207ENST00000555497 ABLIM1O14639 778 aa25.99■■□□□ 1.75
TMEM260-207ENST00000555497 FLT3P36888 993 aa25.99■■□□□ 1.75
TMEM260-207ENST00000555497 EFNA5P52803 228 aa25.99■■□□□ 1.75
TMEM260-207ENST00000555497 TTMPQ5BVD1 217 aa25.99■■□□□ 1.75
TMEM260-207ENST00000555497 CFAP58Q5T655 872 aa25.99■■□□□ 1.75
TMEM260-207ENST00000555497 MORC4Q8TE76 937 aa25.99■■□□□ 1.75
TMEM260-207ENST00000555497 ZC3H15Q8WU90 426 aaKnown RBP25.99■■□□□ 1.75
TMEM260-207ENST00000555497 NAP1L3Q99457 506 aaPredicted RBP25.99■■□□□ 1.75
TMEM260-207ENST00000555497 EFCC1Q9HA90 598 aa25.99■■□□□ 1.75
TMEM260-207ENST00000555497 CST3P01034 146 aaPredicted RBP25.99■■□□□ 1.75
TMEM260-207ENST00000555497 CLTAP09496 248 aa25.99■■□□□ 1.75
TMEM260-207ENST00000555497 CYP2C8P10632 490 aa25.99■■□□□ 1.75
TMEM260-207ENST00000555497 SSTR3P32745 418 aaPredicted RBP25.99■■□□□ 1.75
TMEM260-207ENST00000555497 CTNNA1P35221 906 aaKnown RBP25.99■■□□□ 1.75
TMEM260-207ENST00000555497 BRSK2Q8IWQ3 736 aa25.99■■□□□ 1.75
TMEM260-207ENST00000555497 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.99■■□□□ 1.75
TMEM260-207ENST00000555497 CYFIP2Q96F07 1278 aa25.99■■□□□ 1.75
TMEM260-207ENST00000555497 MRPL4Q9BYD3 311 aaKnown RBP25.99■■□□□ 1.75
TMEM260-207ENST00000555497 PCDHB4Q9Y5E5 795 aa25.99■■□□□ 1.75
TMEM260-207ENST00000555497 SPOPO43791 374 aa25.98■■□□□ 1.75
TMEM260-207ENST00000555497 TOM1L1O75674 476 aa25.98■■□□□ 1.75
TMEM260-207ENST00000555497 KRT14P02533 472 aa25.98■■□□□ 1.75
TMEM260-207ENST00000555497 CYP1A1P04798 512 aaPredicted RBP25.98■■□□□ 1.75
TMEM260-207ENST00000555497 NOP14P78316 857 aaKnown RBP25.98■■□□□ 1.75
TMEM260-207ENST00000555497 TCHPQ9BT92 498 aa25.98■■□□□ 1.75
TMEM260-207ENST00000555497 DPH5Q9H2P9 285 aa25.98■■□□□ 1.75
TMEM260-207ENST00000555497 PPME1Q9Y570 386 aa25.98■■□□□ 1.75
TMEM260-207ENST00000555497 PCDHA3Q9Y5H8 950 aa25.98■■□□□ 1.75
TMEM260-207ENST00000555497 TCRBV7S2A1N4TA0A589 114 aa25.98■■□□□ 1.75
TMEM260-207ENST00000555497 GOLGA6CA6NDK9 693 aa25.98■■□□□ 1.75
TMEM260-207ENST00000555497 OPA1O60313 960 aa25.98■■□□□ 1.75
TMEM260-207ENST00000555497 CLSTN1O94985 981 aa25.98■■□□□ 1.75
TMEM260-207ENST00000555497 PRKCBP05771 671 aa25.98■■□□□ 1.75
TMEM260-207ENST00000555497 GOLGA6DP0CG33 693 aa25.98■■□□□ 1.75
TMEM260-207ENST00000555497 TXNP10599 105 aaKnown RBP25.98■■□□□ 1.75
TMEM260-207ENST00000555497 RRM1P23921 792 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms