RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 ASTN1O14525 1302 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 PRPF3O43395 683 aaKnown RBP5.29□□□□□ -1.56
ATXN3-231ENST00000554994 EPB41L2O43491 1005 aaKnown RBP5.29□□□□□ -1.56
ATXN3-231ENST00000554994 ZEB2O60315 1214 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 EIF4EBP3O60516 100 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-231ENST00000554994 EIF3JO75822 258 aaKnown RBP5.29□□□□□ -1.56
ATXN3-231ENST00000554994 GJB5O95377 273 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 ITIH2P19823 946 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 NDUFV1P49821 464 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 ADCY7P51828 1080 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 ANAPC15P60006 121 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 SP4Q02446 784 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 CBX2Q14781 532 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-231ENST00000554994 PGM5Q15124 567 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 PPP2R5BQ15173 497 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 IFI16Q16666 785 aaKnown RBP5.29□□□□□ -1.56
ATXN3-231ENST00000554994 ZNF423Q2M1K9 1284 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 EPC2Q52LR7 807 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 BRDTQ58F21 947 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-231ENST00000554994 FAM47CQ5HY64 1035 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 TAPT1Q6NXT6 567 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 DHX37Q8IY37 1157 aaKnown RBP5.29□□□□□ -1.56
ATXN3-231ENST00000554994 RUBCNQ92622 972 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 MTMR8Q96EF0 704 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 ZNF274Q96GC6 653 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-231ENST00000554994 PGBD1Q96JS3 809 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 FGD4Q96M96 766 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 IWS1Q96ST2 819 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 PPP1R16BQ96T49 567 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 RAD9AQ99638 391 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 ALDH8A1Q9H2A2 487 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-231ENST00000554994 EHMT1Q9H9B1 1298 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 MLXIPQ9HAP2 919 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 C6orf50Q9HD87 102 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 VTA1Q9NP79 307 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 PXMP2Q9NR77 195 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 IGSF5Q9NSI5 407 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 TMEM260Q9NX78 707 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 TPCN1Q9ULQ1 816 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 PCDHA6Q9UN73 950 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 USP15Q9Y4E8 981 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-231ENST00000554994 PCDHA8Q9Y5H6 950 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 MRVI1Q9Y6F6 885 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 TCHHQ07283 1943 aa5.29□□□□□ -1.56
ATXN3-231ENST00000554994 A0A096LPE4 126 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 A0A1W2PPZ6 126 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 PI15O43692 258 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 MARCH6O60337 910 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 TNFRSF21O75509 655 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 CDKL5O76039 1030 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 BAIAP3O94812 1187 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 TSPAN15O95858 294 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 GH1P01241 217 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 IQCF3P0C7M6 154 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 SCG2P13521 617 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 XBP1P17861 261 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 ICAM3P32942 547 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 HSD17B4P51659 736 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 TRIM29Q14134 588 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 FSCN1Q16658 493 aaKnown RBP5.28□□□□□ -1.56
ATXN3-231ENST00000554994 PFKFB3Q16875 520 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-231ENST00000554994 SPRED3Q2MJR0 410 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 PPM1JQ5JR12 505 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 UTP14CQ5TAP6 766 aaKnown RBP5.28□□□□□ -1.56
ATXN3-231ENST00000554994 PEAR1Q5VY43 1037 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-231ENST00000554994 WWC2Q6AWC2 1192 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 MPZL3Q6UWV2 235 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 TRMT1LQ7Z2T5 733 aaKnown RBP5.28□□□□□ -1.56
ATXN3-231ENST00000554994 TLK2Q86UE8 772 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 NLRX1Q86UT6 975 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 CCDC83Q8IWF9 413 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 KREMEN2Q8NCW0 462 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 SCFD2Q8WU76 684 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 CCDC12Q8WUD4 166 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-231ENST00000554994 RIN2Q8WYP3 895 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-231ENST00000554994 ALG1Q9BT22 464 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 CLEC4MQ9H2X3 399 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-231ENST00000554994 MFSD1Q9H3U5 465 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 PIDD1Q9HB75 910 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 ZFYVE1Q9HBF4 777 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 MAP3K20Q9NYL2 800 aaKnown RBP5.28□□□□□ -1.56
ATXN3-231ENST00000554994 VPS54Q9P1Q0 977 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 POLIQ9UNA4 740 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 LIMCH1Q9UPQ0 1083 aa5.28□□□□□ -1.56
ATXN3-231ENST00000554994 ATG2AQ2TAZ0 1938 aa5.27□□□□□ -1.57
ATXN3-231ENST00000554994 H3BNC9 293 aa5.27□□□□□ -1.57
ATXN3-231ENST00000554994 DDX39AO00148 427 aaKnown RBP5.27□□□□□ -1.57
ATXN3-231ENST00000554994 NOP56O00567 594 aaKnown RBP5.27□□□□□ -1.57
ATXN3-231ENST00000554994 MEIS2O14770 477 aa5.27□□□□□ -1.57
ATXN3-231ENST00000554994 PFKFB2O60825 505 aa5.27□□□□□ -1.57
ATXN3-231ENST00000554994 LEFTY1O75610 366 aa5.27□□□□□ -1.57
ATXN3-231ENST00000554994 DEXIO95424 95 aa5.27□□□□□ -1.57
ATXN3-231ENST00000554994 BRD1O95696 1058 aa5.27□□□□□ -1.57
ATXN3-231ENST00000554994 GGPS1O95749 300 aa5.27□□□□□ -1.57
ATXN3-231ENST00000554994 IFNAR1P17181 557 aa5.27□□□□□ -1.57
ATXN3-231ENST00000554994 ATP2B1P20020 1258 aa5.27□□□□□ -1.57
ATXN3-231ENST00000554994 MZF1P28698 734 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-231ENST00000554994 GNA11P29992 359 aa5.27□□□□□ -1.57
ATXN3-231ENST00000554994 RFC2P35250 354 aa5.27□□□□□ -1.57
ATXN3-231ENST00000554994 CPT1AP50416 773 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms