RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 YARSP54577 528 aaKnown RBP13.47□□□□□ -0.25
SYNE2-214ENST00000554928 KRT17Q04695 432 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 PNOCQ13519 176 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 HSP90AA2PQ14568 343 aaPredicted RBP13.47□□□□□ -0.25
SYNE2-214ENST00000554928 SCARA3Q6AZY7 606 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 TMC7Q7Z402 723 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 APBB1IPQ7Z5R6 666 aaPredicted RBP13.47□□□□□ -0.25
SYNE2-214ENST00000554928 RNF168Q8IYW5 571 aaPredicted RBP13.47□□□□□ -0.25
SYNE2-214ENST00000554928 ZNF507Q8TCN5 953 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 POMGNT1Q8WZA1 660 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 ENTPD7Q9NQZ7 604 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 AGO2Q9UKV8 859 aaKnown RBP13.47□□□□□ -0.25
SYNE2-214ENST00000554928 C2orf71A6NGG8 1288 aa13.46□□□□□ -0.25
SYNE2-214ENST00000554928 I3L4J1 428 aa13.46□□□□□ -0.25
SYNE2-214ENST00000554928 TBX10O75333 385 aa13.46□□□□□ -0.25
SYNE2-214ENST00000554928 CXCL14O95715 111 aa13.46□□□□□ -0.25
SYNE2-214ENST00000554928 RPN1P04843 607 aaKnown RBP13.46□□□□□ -0.25
SYNE2-214ENST00000554928 NFICP08651 508 aa13.46□□□□□ -0.25
SYNE2-214ENST00000554928 COL19A1Q14993 1142 aa13.46□□□□□ -0.25
SYNE2-214ENST00000554928 PTPN14Q15678 1187 aa13.46□□□□□ -0.25
SYNE2-214ENST00000554928 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.46□□□□□ -0.25
SYNE2-214ENST00000554928 SYCP3Q8IZU3 236 aa13.46□□□□□ -0.25
SYNE2-214ENST00000554928 TMEM87AQ8NBN3 555 aa13.46□□□□□ -0.25
SYNE2-214ENST00000554928 FEZF2Q8TBJ5 459 aa13.46□□□□□ -0.25
SYNE2-214ENST00000554928 FAM212AQ96EL1 285 aa13.46□□□□□ -0.25
SYNE2-214ENST00000554928 HERC2P3Q9BVR0 1158 aa13.46□□□□□ -0.25
SYNE2-214ENST00000554928 TOPORSQ9NS56 1045 aaPredicted RBP13.46□□□□□ -0.25
SYNE2-214ENST00000554928 PUF60Q9UHX1 559 aaKnown RBP13.46□□□□□ -0.25
SYNE2-214ENST00000554928 TDRD15B5MCY1 1934 aaKnown RBP13.45□□□□□ -0.26
SYNE2-214ENST00000554928 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.45□□□□□ -0.26
SYNE2-214ENST00000554928 GOLGA6L4A6NEF3 574 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 H3BQ06 376 aaPredicted RBP13.45□□□□□ -0.26
SYNE2-214ENST00000554928 C2CD2LO14523 706 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 PPEF2O14830 753 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 CLIC2O15247 247 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 EIF3DO15371 548 aaKnown RBP eCLIP13.45□□□□□ -0.26
SYNE2-214ENST00000554928 LILRB3O75022 631 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 ADRB2P07550 413 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 CTSAP10619 480 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 CA8P35219 290 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 BRCC3P46736 316 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 KCNQ1P51787 676 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 FAM160A1Q05DH4 1040 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 ALCAMQ13740 583 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 ZBTB6Q15916 424 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 DUSP6Q16828 381 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 UPP1Q16831 310 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 CTC1Q2NKJ3 1217 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 JADE1Q6IE81 842 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 FUT10Q6P4F1 479 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 EP400NLQ6ZTU2 488 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 MRPL43Q8N983 215 aaKnown RBP13.45□□□□□ -0.26
SYNE2-214ENST00000554928 KIF12Q96FN5 646 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 IPO9Q96P70 1041 aaKnown RBP13.45□□□□□ -0.26
SYNE2-214ENST00000554928 FAM213AQ9BRX8 229 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 COLEC11Q9BWP8 271 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 TLE6Q9H808 572 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 UBE2ZQ9H832 354 aaPredicted RBP13.45□□□□□ -0.26
SYNE2-214ENST00000554928 RPF1Q9H9Y2 349 aaKnown RBP13.45□□□□□ -0.26
SYNE2-214ENST00000554928 EXOC1Q9NV70 894 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 CLDND1Q9NY35 253 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 THEGQ9P2T0 379 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 ADAM28Q9UKQ2 775 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 EXOC7Q9UPT5 735 aa13.45□□□□□ -0.26
SYNE2-214ENST00000554928 TRIP11Q15643 1979 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.44□□□□□ -0.26
SYNE2-214ENST00000554928 PODXLO00592 558 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 CLASP2O75122 1294 aaKnown RBP13.44□□□□□ -0.26
SYNE2-214ENST00000554928 TADA2AO75478 443 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 SOD2P04179 222 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 KCNA5P22460 613 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 ABCD1P33897 745 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 ADAM15Q13444 863 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 SMC1AQ14683 1233 aaKnown RBP13.44□□□□□ -0.26
SYNE2-214ENST00000554928 POSTNQ15063 836 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 CLUL1Q15846 466 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 BMT2Q1RMZ1 405 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 RTP2Q5QGT7 225 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 KIAA0319Q5VV43 1072 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 SLFN12LQ6IEE8 588 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 LLGL2Q6P1M3 1020 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 ARMCX5Q6P1M9 558 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 CBWD2Q8IUF1 395 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 EFCAB13Q8IY85 973 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 SMYD4Q8IYR2 804 aaPredicted RBP13.44□□□□□ -0.26
SYNE2-214ENST00000554928 NOC3LQ8WTT2 800 aaKnown RBP13.44□□□□□ -0.26
SYNE2-214ENST00000554928 HLA-CQ95604 372 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 PABPC5Q96DU9 382 aaKnown RBP13.44□□□□□ -0.26
SYNE2-214ENST00000554928 DCBLD2Q96PD2 775 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 TMEM206Q9H813 350 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 NGRNQ9NPE2 291 aaKnown RBP13.44□□□□□ -0.26
SYNE2-214ENST00000554928 AGPAT3Q9NRZ7 376 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 CLEC1BQ9P126 229 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 BARX2Q9UMQ3 279 aaPredicted RBP13.44□□□□□ -0.26
SYNE2-214ENST00000554928 BRWD1Q9NSI6 2320 aa13.44□□□□□ -0.26
SYNE2-214ENST00000554928 B3GAT3O94766 335 aa13.43□□□□□ -0.26
SYNE2-214ENST00000554928 RHOBTB3O94955 611 aa13.43□□□□□ -0.26
SYNE2-214ENST00000554928 CNPP09543 421 aaKnown RBP13.43□□□□□ -0.26
SYNE2-214ENST00000554928 RPL17P18621 184 aaKnown RBP13.43□□□□□ -0.26
SYNE2-214ENST00000554928 GARTP22102 1010 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms