RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 PIN1Q13526 163 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-214ENST00000554819 DACT2Q5SW24 774 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 THEMIS2Q5TEJ8 643 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 GADL1Q6ZQY3 521 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 MED25Q71SY5 747 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 GDF7Q7Z4P5 450 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 SYT12Q8IV01 421 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 SYNE4Q8N205 404 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 PHACTR3Q96KR7 559 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 C11orf54Q9H0W9 315 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-214ENST00000554819 TRPM5Q9NZQ8 1165 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 SLC23A1Q9UHI7 598 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 RUVBL1Q9Y265 456 aaKnown RBP5.24□□□□□ -1.57
SCFD1-214ENST00000554819 ATP11BQ9Y2G3 1177 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 PCDHB1Q9Y5F3 818 aa5.24□□□□□ -1.57
SCFD1-214ENST00000554819 RNASET2O00584 256 aaKnown RBP5.23□□□□□ -1.57
SCFD1-214ENST00000554819 ABLIM3O94929 683 aa5.23□□□□□ -1.57
SCFD1-214ENST00000554819 S100BP04271 92 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-214ENST00000554819 POU2F2P09086 479 aa5.23□□□□□ -1.57
SCFD1-214ENST00000554819 MTHFD1P11586 935 aaKnown RBP5.23□□□□□ -1.57
SCFD1-214ENST00000554819 C6P13671 934 aa5.23□□□□□ -1.57
SCFD1-214ENST00000554819 ZSCAN20P17040 1043 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-214ENST00000554819 MAKP20794 623 aa5.23□□□□□ -1.57
SCFD1-214ENST00000554819 CHN2P52757 468 aa5.23□□□□□ -1.57
SCFD1-214ENST00000554819 RNASE9P60153 205 aaKnown RBP5.23□□□□□ -1.57
SCFD1-214ENST00000554819 SLC25A3Q00325 362 aa5.23□□□□□ -1.57
SCFD1-214ENST00000554819 TARDBPQ13148 414 aaKnown RBP eCLIP5.23□□□□□ -1.57
SCFD1-214ENST00000554819 PLEKHG6Q3KR16 790 aa5.23□□□□□ -1.57
SCFD1-214ENST00000554819 ODR4Q5SWX8 454 aa5.23□□□□□ -1.57
SCFD1-214ENST00000554819 FAM102AQ5T9C2 384 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-214ENST00000554819 USP45Q70EL2 814 aa5.23□□□□□ -1.57
SCFD1-214ENST00000554819 PRR18Q8N4B5 295 aa5.23□□□□□ -1.57
SCFD1-214ENST00000554819 IFI44Q8TCB0 444 aa5.23□□□□□ -1.57
SCFD1-214ENST00000554819 HAS1Q92839 578 aa5.23□□□□□ -1.57
SCFD1-214ENST00000554819 MRGPRX4Q96LA9 322 aa5.23□□□□□ -1.57
SCFD1-214ENST00000554819 CAMKK2Q96RR4 588 aa5.23□□□□□ -1.57
SCFD1-214ENST00000554819 MYOCQ99972 504 aa5.23□□□□□ -1.57
SCFD1-214ENST00000554819 PNMA8BQ9ULN7 279 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-214ENST00000554819 POLHQ9Y253 713 aa5.23□□□□□ -1.57
SCFD1-214ENST00000554819 REXO2Q9Y3B8 237 aaKnown RBP5.23□□□□□ -1.57
SCFD1-214ENST00000554819 AHRRA9YTQ3 701 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 NPIPB8E9PQR5 432 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 KIAA0391O15091 583 aaKnown RBP5.22□□□□□ -1.57
SCFD1-214ENST00000554819 SLC16A6O15403 523 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 AKAP10O43572 662 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 RPS6KA4O75676 772 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 ARIH2O95376 493 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 HLA-DOAP06340 250 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 PF4V1P10720 104 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 MCM7P33993 719 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 GDF5P43026 501 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 RAB27AP51159 221 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 MXRA7P84157 204 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 PABPC1LQ4VXU2 614 aaKnown RBP5.22□□□□□ -1.57
SCFD1-214ENST00000554819 AGAP9Q5VTM2 703 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 UBE3BQ7Z3V4 1068 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 RHOT2Q8IXI1 618 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 FITM2Q8N6M3 262 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 IL17RDQ8NFM7 739 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 NSUN6Q8TEA1 469 aaKnown RBP5.22□□□□□ -1.57
SCFD1-214ENST00000554819 ZNF483Q8TF39 744 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-214ENST00000554819 KAT5Q92993 513 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 ZNF180Q9UJW8 692 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 FZD1Q9UP38 647 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 CHST2Q9Y4C5 530 aa5.22□□□□□ -1.57
SCFD1-214ENST00000554819 USP15Q9Y4E8 981 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-214ENST00000554819 TCRBV7S2A1N4TA0A589 114 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 ZNF202O95125 648 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 CKBP12277 381 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 LAG3P18627 525 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 CYP2C19P33261 490 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 DSC2Q02487 901 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 TLE1Q04724 770 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 ABHD18Q0P651 414 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 TSHZ3Q63HK5 1081 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 METRNLQ641Q3 311 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 ARMC6Q6NXE6 501 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 C3orf20Q8ND61 904 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 JPH3Q8WXH2 748 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-214ENST00000554819 RAB24Q969Q5 203 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 LENG9Q96B70 501 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 GSTO2Q9H4Y5 243 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 NRDE2Q9H7Z3 1164 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 KMT5AQ9NQR1 393 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 SLC2A4RGQ9NR83 387 aa5.21□□□□□ -1.58
SCFD1-214ENST00000554819 ZNF185O15231 689 aa5.2□□□□□ -1.58
SCFD1-214ENST00000554819 NARSO43776 548 aaKnown RBP5.2□□□□□ -1.58
SCFD1-214ENST00000554819 RFPL1O75677 317 aa5.2□□□□□ -1.58
SCFD1-214ENST00000554819 HAUS5O94927 633 aa5.2□□□□□ -1.58
SCFD1-214ENST00000554819 ITGB1P05556 798 aa5.2□□□□□ -1.58
SCFD1-214ENST00000554819 U2AF1L5P0DN76 240 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-214ENST00000554819 GCSHP23434 173 aa5.2□□□□□ -1.58
SCFD1-214ENST00000554819 SMARCA1P28370 1054 aa5.2□□□□□ -1.58
SCFD1-214ENST00000554819 ZNF280AP59817 542 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-214ENST00000554819 U2AF1Q01081 240 aaKnown RBP eCLIP5.2□□□□□ -1.58
SCFD1-214ENST00000554819 PGS1Q32NB8 556 aa5.2□□□□□ -1.58
SCFD1-214ENST00000554819 KHDC1Q4VXA5 237 aaKnown RBP5.2□□□□□ -1.58
SCFD1-214ENST00000554819 TIGD2Q4W5G0 525 aa5.2□□□□□ -1.58
SCFD1-214ENST00000554819 PDCD4Q53EL6 469 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms