RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 IGF2BP3O00425 579 aaKnown RBP eCLIP12.63□□□□□ -0.39
XRCC3-208ENST00000554811 CFHP08603 1231 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 SRGAP2CP0DJJ0 459 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 NOP14P78316 857 aaKnown RBP12.63□□□□□ -0.39
XRCC3-208ENST00000554811 ZBTB16Q05516 673 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 GPS1Q13098 491 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 AUHQ13825 339 aaKnown RBP12.63□□□□□ -0.39
XRCC3-208ENST00000554811 BMT2Q1RMZ1 405 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 HHATQ5VTY9 493 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 TATDN1Q6P1N9 297 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 SPOCK2Q92563 424 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 TBX20Q9UMR3 447 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 TMX2Q9Y320 296 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 TFAMQ00059 246 aaKnown RBP12.63□□□□□ -0.39
XRCC3-208ENST00000554811 KCNT1Q5JUK3 1230 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 ERMARDQ5T6L9 678 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 CYP4A22Q5TCH4 519 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 MICAL1Q8TDZ2 1067 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 STAMBPL1Q96FJ0 436 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 RUNDC3BQ96NL0 473 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 PITPNM3Q9BZ71 974 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 GRHL1Q9NZI5 618 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 SERPINA10Q9UK55 444 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 VIL1P09327 827 aaKnown RBP12.63□□□□□ -0.39
XRCC3-208ENST00000554811 MYBL1P10243 752 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 EXOC3L1Q86VI1 746 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 FMNL3Q8IVF7 1028 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 ZBED8Q8IZ13 594 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 ATG4CQ96DT6 458 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 RBM15Q96T37 977 aaKnown RBP eCLIP12.63□□□□□ -0.39
XRCC3-208ENST00000554811 IDI2Q9BXS1 227 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 SLC24A3Q9HC58 644 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 RNF146Q9NTX7 359 aa12.63□□□□□ -0.39
XRCC3-208ENST00000554811 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.63□□□□□ -0.39
XRCC3-208ENST00000554811 YDJCA8MPS7 323 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 WDR64B1ANS9 1081 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 CHRNB2P17787 502 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 GNA15P30679 374 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 NOVP48745 357 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 FAM43BQ6ZT52 329 aaPredicted RBP12.62□□□□□ -0.39
XRCC3-208ENST00000554811 POLR3FQ9H1D9 316 aaPredicted RBP12.62□□□□□ -0.39
XRCC3-208ENST00000554811 C12orf65Q9H3J6 166 aaKnown RBP12.62□□□□□ -0.39
XRCC3-208ENST00000554811 CXorf56Q9H5V9 222 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 ETNK1Q9HBU6 452 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 ZDHHC18Q9NUE0 388 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 BTNL10A8MVZ5 291 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 ZBED4O75132 1171 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 UPP2O95045 317 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 AGTP01019 485 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 FNTAP49354 379 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 KIF22Q14807 665 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 SNRNP48Q6IEG0 339 aaKnown RBP12.62□□□□□ -0.39
XRCC3-208ENST00000554811 DPY19L2P1Q6NXN4 242 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 CCDC33Q8N5R6 958 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 LRRN4Q8WUT4 740 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 SNF8Q96H20 258 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 NCAPGQ9BPX3 1015 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 TARS2Q9BW92 718 aaKnown RBP12.62□□□□□ -0.39
XRCC3-208ENST00000554811 NOD2Q9HC29 1040 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 NCANO14594 1321 aa12.62□□□□□ -0.39
XRCC3-208ENST00000554811 PSMC5P62195 406 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 CDR2Q01850 454 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 OVGP1Q12889 678 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 NEDD9Q14511 834 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 BBS9Q3SYG4 887 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 ACCSLQ4AC99 568 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 EAPPQ56P03 285 aaPredicted RBP12.61□□□□□ -0.39
XRCC3-208ENST00000554811 THNSL1Q8IYQ7 743 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.61□□□□□ -0.39
XRCC3-208ENST00000554811 PARD3BQ8TEW8 1205 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 BSNDQ8WZ55 320 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 BORCS6Q96GS4 357 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 MBOAT7Q96N66 472 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 TMEM237Q96Q45 408 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 COL16A1Q07092 1604 aaPredicted RBP12.61□□□□□ -0.39
XRCC3-208ENST00000554811 NHSL1Q5SYE7 1610 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 SPDYE2BA6NHP3 402 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 HLA-DRAP01903 254 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 ASNSP08243 561 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 WEE2P0C1S8 567 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 SPDYE6P0CI01 402 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 HSPA6P17066 643 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 ARSEP51690 589 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 SETDB1Q15047 1291 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 CTAGE3PQ8IX95 158 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 FIZ1Q96SL8 496 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 RPAP3Q9H6T3 665 aaPredicted RBP12.61□□□□□ -0.39
XRCC3-208ENST00000554811 CES2O00748 559 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 DIAPH2O60879 1101 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 MRPS9P82933 396 aaKnown RBP12.61□□□□□ -0.39
XRCC3-208ENST00000554811 LACTBP83111 547 aaPredicted RBP12.61□□□□□ -0.39
XRCC3-208ENST00000554811 RNASELQ05823 741 aaKnown RBP12.61□□□□□ -0.39
XRCC3-208ENST00000554811 CYP4X1Q8N118 509 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.61□□□□□ -0.39
XRCC3-208ENST00000554811 MCEEQ96PE7 176 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 MSTO1Q9BUK6 570 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 CALN1Q9BXU9 219 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 OSBPL8Q9BZF1 889 aa12.61□□□□□ -0.39
XRCC3-208ENST00000554811 HERC5Q9UII4 1024 aaKnown RBP12.61□□□□□ -0.39
XRCC3-208ENST00000554811 GTF3C4Q9UKN8 822 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms