RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 LGALS4P56470 323 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 RAP2BP61225 183 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 SEPT7Q16181 437 aaKnown RBP3.42□□□□□ -1.86
SRP54-204ENST00000553923 KIAA1614Q5VZ46 1190 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 C11orf87Q6NUJ2 197 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 THNSL2Q86YJ6 484 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 DRC7Q8IY82 874 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 PDPRQ8NCN5 879 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 OR7D4Q8NG98 312 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 HASPINQ8TF76 798 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 C8orf37Q96NL8 207 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 MRI1Q9BV20 369 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 HSFX1Q9UBD0 423 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 CDK11AQ9UQ88 783 aaPredicted RBP3.42□□□□□ -1.86
SRP54-204ENST00000553923 DMTF1Q9Y222 760 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 MANSC4A6NHS7 340 aaPredicted RBP3.41□□□□□ -1.86
SRP54-204ENST00000553923 TP73O15350 636 aa3.41□□□□□ -1.86
SRP54-204ENST00000553923 KDM1AO60341 852 aa3.41□□□□□ -1.86
SRP54-204ENST00000553923 POMCP01189 267 aa3.41□□□□□ -1.86
SRP54-204ENST00000553923 CDK11BP21127 795 aaKnown RBP3.41□□□□□ -1.86
SRP54-204ENST00000553923 ADSLP30566 484 aaPredicted RBP3.41□□□□□ -1.86
SRP54-204ENST00000553923 SREBF1P36956 1147 aa3.41□□□□□ -1.86
SRP54-204ENST00000553923 LSSP48449 732 aa3.41□□□□□ -1.86
SRP54-204ENST00000553923 SCNN1BP51168 640 aa3.41□□□□□ -1.86
SRP54-204ENST00000553923 PDCD1Q15116 288 aa3.41□□□□□ -1.86
SRP54-204ENST00000553923 CT83Q5H943 113 aa3.41□□□□□ -1.86
SRP54-204ENST00000553923 RRP12Q5JTH9 1297 aaKnown RBP3.41□□□□□ -1.86
SRP54-204ENST00000553923 AKNAD1Q5T1N1 836 aa3.41□□□□□ -1.86
SRP54-204ENST00000553923 AFMIDQ63HM1 303 aa3.41□□□□□ -1.86
SRP54-204ENST00000553923 SSH3Q8TE77 659 aa3.41□□□□□ -1.86
SRP54-204ENST00000553923 PAWRQ96IZ0 340 aaKnown RBP3.41□□□□□ -1.86
SRP54-204ENST00000553923 GPR101Q96P66 508 aaPredicted RBP3.41□□□□□ -1.86
SRP54-204ENST00000553923 REXO4Q9GZR2 422 aaKnown RBP3.41□□□□□ -1.86
SRP54-204ENST00000553923 BCO1Q9HAY6 547 aa3.41□□□□□ -1.86
SRP54-204ENST00000553923 FBXO34Q9NWN3 711 aa3.41□□□□□ -1.86
SRP54-204ENST00000553923 SLC23A1Q9UHI7 598 aa3.41□□□□□ -1.86
SRP54-204ENST00000553923 SCOCQ9UIL1 159 aa3.41□□□□□ -1.86
SRP54-204ENST00000553923 PROM1O43490 865 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 PRKCGP05129 697 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 HMGB1P09429 215 aaKnown RBP3.4□□□□□ -1.87
SRP54-204ENST00000553923 CKBP12277 381 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 HOXB6P17509 224 aaKnown RBP3.4□□□□□ -1.87
SRP54-204ENST00000553923 GUCY1A2P33402 732 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 ADCYAP1R1P41586 468 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 NEK4P51957 841 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 MAPK10P53779 464 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 TFF2Q03403 129 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 SF3B3Q15393 1217 aaKnown RBP3.4□□□□□ -1.87
SRP54-204ENST00000553923 GEN1Q17RS7 908 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 BROXQ5VW32 411 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 OTUD7BQ6GQQ9 843 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 VWA1Q6PCB0 445 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 GRASPQ7Z6J2 395 aaPredicted RBP3.4□□□□□ -1.87
SRP54-204ENST00000553923 LRRTM3Q86VH5 581 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 RASSF3Q86WH2 238 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 GPR156Q8NFN8 814 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 FBXO18Q8NFZ0 1043 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 PMFBP1Q8TBY8 1022 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 SH3TC2Q8TF17 1288 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 RIN2Q8WYP3 895 aaPredicted RBP3.4□□□□□ -1.87
SRP54-204ENST00000553923 HOXB13Q92826 284 aaPredicted RBP3.4□□□□□ -1.87
SRP54-204ENST00000553923 ZBTB9Q96C00 473 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 EAF2Q96CJ1 260 aaPredicted RBP3.4□□□□□ -1.87
SRP54-204ENST00000553923 HEPHQ9BQS7 1158 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 FLRT1Q9NZU1 646 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 KCNG1Q9UIX4 513 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 ADAM21Q9UKJ8 722 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 ZNF804BA4D1E1 1349 aa3.4□□□□□ -1.87
SRP54-204ENST00000553923 MPPED1O15442 326 aa3.39□□□□□ -1.87
SRP54-204ENST00000553923 PEX1O43933 1283 aa3.39□□□□□ -1.87
SRP54-204ENST00000553923 EIF2B5Q13144 721 aaKnown RBP3.39□□□□□ -1.87
SRP54-204ENST00000553923 CRELD2Q6UXH1 353 aaPredicted RBP3.39□□□□□ -1.87
SRP54-204ENST00000553923 SEM1Q6ZVN7 128 aa3.39□□□□□ -1.87
SRP54-204ENST00000553923 PEG10Q86TG7 708 aaKnown RBP3.39□□□□□ -1.87
SRP54-204ENST00000553923 COLGALT2Q8IYK4 626 aa3.39□□□□□ -1.87
SRP54-204ENST00000553923 MARS2Q96GW9 593 aaKnown RBP3.39□□□□□ -1.87
SRP54-204ENST00000553923 MYOCQ99972 504 aa3.39□□□□□ -1.87
SRP54-204ENST00000553923 OSBPL2Q9H1P3 480 aa3.39□□□□□ -1.87
SRP54-204ENST00000553923 CPNE5Q9HCH3 593 aa3.39□□□□□ -1.87
SRP54-204ENST00000553923 EDARQ9UNE0 448 aa3.39□□□□□ -1.87
SRP54-204ENST00000553923 TRIM38O00635 465 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 AKR1B10O60218 316 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 FKBP9O95302 570 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 SRGNP10124 158 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 IL2RBP14784 551 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 ATP5JP18859 108 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 GPD1P21695 349 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 GRIA3P42263 894 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 SOX10P56693 466 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 NOMO3P69849 1222 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 OCRLQ01968 901 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 NOMO1Q15155 1222 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 EZH2Q15910 746 aaKnown RBP3.38□□□□□ -1.87
SRP54-204ENST00000553923 NOMO2Q5JPE7 1267 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 FCRLBQ6BAA4 426 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 FKBP9P1Q75LS8 142 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 SYNPOQ8N3V7 929 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 TSPEARQ8WU66 669 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 STON2Q8WXE9 905 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 ZNF48Q96MX3 618 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms