RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 ENTPD7Q9NQZ7 604 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 MARCH5Q9NX47 278 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 ADAM28Q9UKQ2 775 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 UBQLN1Q9UMX0 589 aaKnown RBP10.16□□□□□ -0.78
CHD8-206ENST00000553870 C2CD2Q9Y426 696 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 PRRC2BQ5JSZ5 2229 aaKnown RBP10.16□□□□□ -0.78
CHD8-206ENST00000553870 CHD7Q9P2D1 2997 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.15□□□□□ -0.78
CHD8-206ENST00000553870 PDXKO00764 312 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 TGFB1I1O43294 461 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 TRAPPC3O43617 180 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 CXCL8P10145 99 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 LRPAP1P30533 357 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 IRS1P35568 1242 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 TNFSF9P41273 254 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 ACOT2P49753 483 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 DSG1Q02413 1049 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 MYBPC2Q14324 1141 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 SURF1Q15526 300 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 CCDC85BQ15834 202 aaPredicted RBP10.15□□□□□ -0.78
CHD8-206ENST00000553870 AAK1Q2M2I8 961 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 USP41Q3LFD5 358 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 TPRNQ4KMQ1 711 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 TCEAL5Q5H9L2 206 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 GLRA4Q5JXX5 417 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 ARMCX5Q6P1M9 558 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 FUT10Q6P4F1 479 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 PDXDC1Q6P996 788 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 CRELD2Q6UXH1 353 aaPredicted RBP10.15□□□□□ -0.78
CHD8-206ENST00000553870 TMEM173Q86WV6 379 aaPredicted RBP10.15□□□□□ -0.78
CHD8-206ENST00000553870 GPD1LQ8N335 351 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 EFHBQ8N7U6 833 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 SPATA20Q8TB22 786 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 CACTINQ8WUQ7 758 aaKnown RBP10.15□□□□□ -0.78
CHD8-206ENST00000553870 ATXN2LQ8WWM7 1075 aaKnown RBP10.15□□□□□ -0.78
CHD8-206ENST00000553870 PPM1EQ8WY54 764 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 HLA-CQ95604 372 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 PABPC5Q96DU9 382 aaKnown RBP10.15□□□□□ -0.78
CHD8-206ENST00000553870 FBXL18Q96ME1 805 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 ZMAT2Q96NC0 199 aaKnown RBP10.15□□□□□ -0.78
CHD8-206ENST00000553870 GBP4Q96PP9 640 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 HERC2P3Q9BVR0 1158 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 ZBP1Q9H171 429 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 TLE6Q9H808 572 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 MRPL17Q9NRX2 175 aaKnown RBP10.15□□□□□ -0.78
CHD8-206ENST00000553870 CHST7Q9NS84 486 aa10.15□□□□□ -0.78
CHD8-206ENST00000553870 PRG3Q9Y2Y8 225 aaPredicted RBP10.15□□□□□ -0.78
CHD8-206ENST00000553870 CDH23Q9H251 3354 aa10.15□□□□□ -0.79
CHD8-206ENST00000553870 SF3B1O75533 1304 aaKnown RBP eCLIP10.14□□□□□ -0.791e-7■■■■■ 172.3
CHD8-206ENST00000553870 TDRD15B5MCY1 1934 aaKnown RBP10.14□□□□□ -0.79
CHD8-206ENST00000553870 C2orf71A6NGG8 1288 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 CASTOR2A6NHX0 329 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 ZNF233A6NK53 670 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 TISP43B9A030 160 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 MEFVO15553 781 aaPredicted RBP10.14□□□□□ -0.79
CHD8-206ENST00000553870 LILRB3O75022 631 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 GADD45BO75293 160 aaPredicted RBP10.14□□□□□ -0.79
CHD8-206ENST00000553870 PRPF40AO75400 957 aaKnown RBP10.14□□□□□ -0.79
CHD8-206ENST00000553870 B3GAT3O94766 335 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 URODP06132 367 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 CLCNKBP51801 687 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 CREMQ03060 361 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 ADAM15Q13444 863 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 SKIV2LQ15477 1246 aaKnown RBP10.14□□□□□ -0.79
CHD8-206ENST00000553870 CTC1Q2NKJ3 1217 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 SEZ6Q53EL9 994 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 COBLL1Q53SF7 1204 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 KIAA0319Q5VV43 1072 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 SPATA1Q5VX52 437 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 KIAA1841Q6NSI8 718 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 TMEM184AQ6ZMB5 413 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 PPFIBP1Q86W92 1011 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 SLC9A9Q8IVB4 645 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 GUF1Q8N442 669 aaKnown RBP10.14□□□□□ -0.79
CHD8-206ENST00000553870 XXYLT1Q8NBI6 393 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 KIAA0895Q8NCT3 520 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 GLIS3Q8NEA6 775 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 BEST2Q8NFU1 509 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 BCL7CQ8WUZ0 217 aaPredicted RBP10.14□□□□□ -0.79
CHD8-206ENST00000553870 SMARCE1Q969G3 411 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 KIF12Q96FN5 646 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 CBWD1Q9BRT8 395 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 FAM213AQ9BRX8 229 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 EMILIN2Q9BXX0 1053 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 CXCL16Q9H2A7 254 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 RXFP1Q9HBX9 757 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.14□□□□□ -0.79
CHD8-206ENST00000553870 AGPAT3Q9NRZ7 376 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 HSPBP1Q9NZL4 362 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 KIAA1671Q9BY89 1806 aa10.14□□□□□ -0.79
CHD8-206ENST00000553870 PODXLO00592 558 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 PRR29P0C7W0 189 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 SRGAP2BP0DMP2 458 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 PPP1R2P41236 205 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 GLUD2P49448 558 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 HYAL1Q12794 435 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 PNOCQ13519 176 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 TMEM132DQ14C87 1099 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 PTPN14Q15678 1187 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 NFIL3Q16649 462 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms