RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 ASB7Q9H672 318 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 RPF1Q9H9Y2 349 aaKnown RBP12.69□□□□□ -0.38
PSMC6-204ENST00000553798 AGPAT3Q9NRZ7 376 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 LMBRD1Q9NUN5 540 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 RMND1Q9NWS8 449 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 MARCH5Q9NX47 278 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 METRNQ9UJH8 293 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 PLXNA4Q9HCM2 1894 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 LACTBL1A8MY62 500 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 TMEM189-UBE2V1I3L0A0 370 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 FSCN2O14926 492 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 ATMINO43313 823 aaPredicted RBP12.68□□□□□ -0.38
PSMC6-204ENST00000553798 EXTL3O43909 919 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 OR1G1P47890 313 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 TIGD5Q53EQ6 642 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 COBLL1Q53SF7 1204 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 GLRA4Q5JXX5 417 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 ARMCX5Q6P1M9 558 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 HS2ST1Q7LGA3 356 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 NELFCDQ8IXH7 590 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 RNF168Q8IYW5 571 aaPredicted RBP12.68□□□□□ -0.38
PSMC6-204ENST00000553798 GUF1Q8N442 669 aaKnown RBP12.68□□□□□ -0.38
PSMC6-204ENST00000553798 SMARCE1Q969G3 411 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 DDX27Q96GQ7 796 aaKnown RBP12.68□□□□□ -0.38
PSMC6-204ENST00000553798 COLEC11Q9BWP8 271 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 VN1R3Q9BXE9 311 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 KIAA1586Q9HCI6 787 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 TLR9Q9NR96 1032 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 DERAQ9Y315 318 aa12.68□□□□□ -0.38
PSMC6-204ENST00000553798 PDXKO00764 312 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 KIF20AO95235 890 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 IL18RAPO95256 599 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 CYP3A5P20815 502 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 RPL9P32969 192 aaKnown RBP12.67□□□□□ -0.38
PSMC6-204ENST00000553798 ERVFC1P60507 584 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 PPP2R3AQ06190 1150 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 SOX4Q06945 474 aaPredicted RBP12.67□□□□□ -0.38
PSMC6-204ENST00000553798 MYBPC2Q14324 1141 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 HSP90AA2PQ14568 343 aaPredicted RBP12.67□□□□□ -0.38
PSMC6-204ENST00000553798 UPP1Q16831 310 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 ZNF658Q5TYW1 1059 aaPredicted RBP12.67□□□□□ -0.38
PSMC6-204ENST00000553798 DCLRE1AQ6PJP8 1040 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 SLC9A9Q8IVB4 645 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 BRSK2Q8IWQ3 736 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 GPR65Q8IYL9 337 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 GPD1LQ8N335 351 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 ZSWIM2Q8NEG5 633 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 MAFAQ8NHW3 353 aaPredicted RBP12.67□□□□□ -0.38
PSMC6-204ENST00000553798 PAAF1Q9BRP4 392 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 FAM213AQ9BRX8 229 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 NSUN3Q9H649 340 aaKnown RBP12.67□□□□□ -0.38
PSMC6-204ENST00000553798 NGRNQ9NPE2 291 aaKnown RBP12.67□□□□□ -0.38
PSMC6-204ENST00000553798 DMAC2Q9NW81 257 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 HSPBP1Q9NZL4 362 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 ADAM28Q9UKQ2 775 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 PRG3Q9Y2Y8 225 aaPredicted RBP12.67□□□□□ -0.38
PSMC6-204ENST00000553798 C2CD2Q9Y426 696 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 IRAK3Q9Y616 596 aa12.67□□□□□ -0.38
PSMC6-204ENST00000553798 PDCD11Q14690 1871 aaKnown RBP12.67□□□□□ -0.38
PSMC6-204ENST00000553798 CASTOR2A6NHX0 329 aa12.66□□□□□ -0.38
PSMC6-204ENST00000553798 F8W810 466 aa12.66□□□□□ -0.38
PSMC6-204ENST00000553798 CTSAP10619 480 aa12.66□□□□□ -0.38
PSMC6-204ENST00000553798 LRPAP1P30533 357 aa12.66□□□□□ -0.38
PSMC6-204ENST00000553798 IRS1P35568 1242 aa12.66□□□□□ -0.38
PSMC6-204ENST00000553798 COL19A1Q14993 1142 aa12.66□□□□□ -0.38
PSMC6-204ENST00000553798 NFIL3Q16649 462 aa12.66□□□□□ -0.38
PSMC6-204ENST00000553798 SPATA1Q5VX52 437 aa12.66□□□□□ -0.38
PSMC6-204ENST00000553798 CD300LGQ6UXG3 332 aa12.66□□□□□ -0.38
PSMC6-204ENST00000553798 NT5DC4Q86YG4 428 aa12.66□□□□□ -0.38
PSMC6-204ENST00000553798 VPS52Q8N1B4 723 aa12.66□□□□□ -0.38
PSMC6-204ENST00000553798 MRPL43Q8N983 215 aaKnown RBP12.66□□□□□ -0.38
PSMC6-204ENST00000553798 XXYLT1Q8NBI6 393 aa12.66□□□□□ -0.38
PSMC6-204ENST00000553798 ERCC4Q92889 916 aaPredicted RBP12.66□□□□□ -0.38
PSMC6-204ENST00000553798 C18orf25Q96B23 403 aaPredicted RBP12.66□□□□□ -0.38
PSMC6-204ENST00000553798 SAAL1Q96ER3 474 aa12.66□□□□□ -0.38
PSMC6-204ENST00000553798 PCIF1Q9H4Z3 704 aa12.66□□□□□ -0.38
PSMC6-204ENST00000553798 CHST7Q9NS84 486 aa12.66□□□□□ -0.38
PSMC6-204ENST00000553798 UBQLN1Q9UMX0 589 aaKnown RBP12.66□□□□□ -0.38
PSMC6-204ENST00000553798 TRAF3IP3Q9Y228 551 aa12.66□□□□□ -0.38
PSMC6-204ENST00000553798 ATG2AQ2TAZ0 1938 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 GOLGA8IPA6NC78 632 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 ZNF233A6NK53 670 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 GOLGA8JA6NMD2 632 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 GOLGA6L22H0YM25 854 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 CLIC2O15247 247 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 XPOTO43592 962 aaKnown RBP12.65□□□□□ -0.38
PSMC6-204ENST00000553798 LILRB3O75022 631 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 TADA2AO75478 443 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 KIF4AO95239 1232 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 SOD2P04179 222 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 CLCNKBP51801 687 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 ZCWPW2Q504Y3 356 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 JADE1Q6IE81 842 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 TMC7Q7Z402 723 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 CBWD2Q8IUF1 395 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 RABGGTAQ92696 567 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 KIF12Q96FN5 646 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 TCF25Q9BQ70 676 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 GPR62Q9BZJ7 368 aa12.65□□□□□ -0.38
PSMC6-204ENST00000553798 ZBP1Q9H171 429 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms