RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 PPP2R3AQ06190 1150 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 TYRO3Q06418 890 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 RBL2Q08999 1139 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 SPEM2Q0P670 501 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 PABPC4Q13310 644 aaKnown RBP eCLIP4.32□□□□□ -1.722e-12■□□□□ 10.2
RDH11-204ENST00000553578 ARHGEF6Q15052 776 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 SPDYCQ5MJ68 293 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 SH2D4BQ5SQS7 431 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 PLBD1Q6P4A8 553 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 POTEAQ6S8J7 498 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 CCBE1Q6UXH8 406 aaPredicted RBP4.32□□□□□ -1.72
RDH11-204ENST00000553578 KIAA1958Q8N8K9 716 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 SUN5Q8TC36 379 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 SNX29Q8TEQ0 813 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 COL26A1Q96A83 441 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 ZNF653Q96CK0 615 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 DBNDD2Q9BQY9 259 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 FUT8Q9BYC5 575 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 ADAM19Q9H013 955 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 VCPKMTQ9H867 229 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 ZWILCHQ9H900 591 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 TCP11L1Q9NUJ3 509 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 C14orf119Q9NWQ9 140 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.32□□□□□ -1.72
RDH11-204ENST00000553578 MTUS1Q9ULD2 1270 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 PLAAQ9Y263 795 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 C2CD2Q9Y426 696 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 MYH6P13533 1939 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 DICER1Q9UPY3 1922 aaKnown RBP4.32□□□□□ -1.72
RDH11-204ENST00000553578 ARHGEF37A1IGU5 675 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 EFCAB8A8MWE9 144 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 SPTLC2O15270 562 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 XYLBO75191 536 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 SMNDC1O75940 238 aaKnown RBP eCLIP4.32□□□□□ -1.72
RDH11-204ENST00000553578 LUC7L3O95232 432 aaKnown RBP4.32□□□□□ -1.72
RDH11-204ENST00000553578 ALAS2P22557 587 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 MCAMP43121 646 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 WTAPQ15007 396 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 ACCSLQ4AC99 568 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 LRRC24Q50LG9 513 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 INO80DQ53TQ3 878 aaPredicted RBP4.32□□□□□ -1.72
RDH11-204ENST00000553578 CCDC93Q567U6 631 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 PLEKHG4Q58EX7 1191 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 FAM182BQ5T319 152 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 TMEM53Q6P2H8 277 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 PKN3Q6P5Z2 889 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 USP53Q70EK8 1073 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 HEATR4Q86WZ0 1026 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 FERMT2Q96AC1 680 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 IWS1Q96ST2 819 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 BRIP1Q9BX63 1249 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 KCND1Q9NSA2 647 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.32□□□□□ -1.72
RDH11-204ENST00000553578 ZSWIM5Q9P217 1185 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 MTMR6Q9Y217 621 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 RTCBQ9Y3I0 505 aaKnown RBP4.32□□□□□ -1.72
RDH11-204ENST00000553578 SQORQ9Y6N5 450 aa4.32□□□□□ -1.72
RDH11-204ENST00000553578 TARSL2A2RTX5 802 aaKnown RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 IQCA1LA6NCM1 817 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 A6NCN8 305 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 TNFRSF21O75509 655 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 IL1R1P14778 569 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 PMS1P54277 932 aaKnown RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 PMS2P54278 862 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 CSE1LP55060 971 aaKnown RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 PCBP4P57723 403 aaKnown RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 TUBA1BP68363 451 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 ADCK5Q3MIX3 580 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 ATP13A4Q4VNC1 1196 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 CFAP157Q5JU67 520 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 LCE2CQ5TA81 110 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 STOX1Q6ZVD7 989 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 TUBA1AQ71U36 451 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 DHX32Q7L7V1 743 aaKnown RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 STRA8Q7Z7C7 330 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 BRSK2Q8IWQ3 736 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 MPP5Q8N3R9 675 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 TNIP2Q8NFZ5 429 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 RASSF8Q8NHQ8 419 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 STAMQ92783 540 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 BRF1Q92994 677 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 DHTKD1Q96HY7 919 aaPredicted RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 EAF1Q96JC9 268 aaPredicted RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 ZDHHC15Q96MV8 337 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 TMEM74Q96NL1 305 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 SEC62Q99442 399 aaKnown RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 RTFDC1Q9BY42 306 aaPredicted RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 UBXN6Q9BZV1 441 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 NDFIP2Q9NV92 336 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 CHMP2BQ9UQN3 213 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 PCDHB14Q9Y5E9 798 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 NEDD4P46934 1319 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 MYH1P12882 1939 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 CCDC69A6NI79 296 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 SART1O43290 800 aaKnown RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 F13A1P00488 732 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 F2P00734 622 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 THBS1P07996 1170 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 ARAFP10398 606 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 OXCT1P55809 520 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms