RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 ZSWIM2Q8NEG5 633 aa24.83■■□□□ 1.57
TDP1-206ENST00000553569 KIF12Q96FN5 646 aa24.83■■□□□ 1.57
TDP1-206ENST00000553569 FAM213AQ9BRX8 229 aa24.83■■□□□ 1.57
TDP1-206ENST00000553569 PLEKHA5Q9HAU0 1116 aa24.83■■□□□ 1.57
TDP1-206ENST00000553569 NGRNQ9NPE2 291 aaKnown RBP24.83■■□□□ 1.57
TDP1-206ENST00000553569 ADAM28Q9UKQ2 775 aa24.83■■□□□ 1.57
TDP1-206ENST00000553569 GOLGA8IPA6NC78 632 aa24.82■■□□□ 1.56
TDP1-206ENST00000553569 GOLGA8JA6NMD2 632 aa24.82■■□□□ 1.56
TDP1-206ENST00000553569 HIDE1A8MVS5 230 aa24.82■■□□□ 1.56
TDP1-206ENST00000553569 TADA2AO75478 443 aa24.82■■□□□ 1.56
TDP1-206ENST00000553569 NRIP1P48552 1158 aa24.82■■□□□ 1.56
TDP1-206ENST00000553569 CLCNKBP51801 687 aa24.82■■□□□ 1.56
TDP1-206ENST00000553569 PSMD2Q13200 908 aa24.82■■□□□ 1.56
TDP1-206ENST00000553569 BMS1Q14692 1282 aaKnown RBP24.82■■□□□ 1.56
TDP1-206ENST00000553569 FUT10Q6P4F1 479 aa24.82■■□□□ 1.56
TDP1-206ENST00000553569 EP400NLQ6ZTU2 488 aa24.82■■□□□ 1.56
TDP1-206ENST00000553569 HERC2P3Q9BVR0 1158 aa24.82■■□□□ 1.56
TDP1-206ENST00000553569 TUBGCP4Q9UGJ1 667 aa24.82■■□□□ 1.56
TDP1-206ENST00000553569 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.81■■□□□ 1.56
TDP1-206ENST00000553569 PER2O15055 1255 aa24.81■■□□□ 1.56
TDP1-206ENST00000553569 KINO60870 393 aaKnown RBP24.81■■□□□ 1.56
TDP1-206ENST00000553569 CTSAP10619 480 aa24.81■■□□□ 1.56
TDP1-206ENST00000553569 BMT2Q1RMZ1 405 aa24.81■■□□□ 1.56
TDP1-206ENST00000553569 TMEM130Q8N3G9 435 aa24.81■■□□□ 1.56
TDP1-206ENST00000553569 UROC1Q96N76 676 aa24.81■■□□□ 1.56
TDP1-206ENST00000553569 TLE6Q9H808 572 aa24.81■■□□□ 1.56
TDP1-206ENST00000553569 TGFB1I1O43294 461 aa24.8■■□□□ 1.56
TDP1-206ENST00000553569 PRPF40AO75400 957 aaKnown RBP24.8■■□□□ 1.56
TDP1-206ENST00000553569 RHOBTB3O94955 611 aa24.8■■□□□ 1.56
TDP1-206ENST00000553569 CXCL14O95715 111 aa24.8■■□□□ 1.56
TDP1-206ENST00000553569 SOD2P04179 222 aa24.8■■□□□ 1.56
TDP1-206ENST00000553569 UBE2HP62256 183 aa24.8■■□□□ 1.56
TDP1-206ENST00000553569 CRELD2Q6UXH1 353 aaPredicted RBP24.8■■□□□ 1.56
TDP1-206ENST00000553569 TAS1R1Q7RTX1 841 aa24.8■■□□□ 1.56
TDP1-206ENST00000553569 ERCC4Q92889 916 aaPredicted RBP24.8■■□□□ 1.56
TDP1-206ENST00000553569 TIGD1Q96MW7 591 aa24.8■■□□□ 1.56
TDP1-206ENST00000553569 GPR62Q9BZJ7 368 aa24.8■■□□□ 1.56
TDP1-206ENST00000553569 AGPAT3Q9NRZ7 376 aa24.8■■□□□ 1.56
TDP1-206ENST00000553569 CLDND1Q9NY35 253 aa24.8■■□□□ 1.56
TDP1-206ENST00000553569 THEGQ9P2T0 379 aa24.8■■□□□ 1.56
TDP1-206ENST00000553569 STK39Q9UEW8 545 aa24.8■■□□□ 1.56
TDP1-206ENST00000553569 REV3LO60673 3130 aa24.79■■□□□ 1.56
TDP1-206ENST00000553569 C2orf71A6NGG8 1288 aa24.79■■□□□ 1.56
TDP1-206ENST00000553569 PODXLO00592 558 aa24.79■■□□□ 1.56
TDP1-206ENST00000553569 C2CD2LO14523 706 aa24.79■■□□□ 1.56
TDP1-206ENST00000553569 CLIC2O15247 247 aa24.79■■□□□ 1.56
TDP1-206ENST00000553569 B3GAT3O94766 335 aa24.79■■□□□ 1.56
TDP1-206ENST00000553569 LDHAP00338 332 aaKnown RBP24.79■■□□□ 1.56
TDP1-206ENST00000553569 URODP06132 367 aa24.79■■□□□ 1.56
TDP1-206ENST00000553569 NFICP08651 508 aa24.79■■□□□ 1.56
TDP1-206ENST00000553569 UPP1Q16831 310 aa24.79■■□□□ 1.56
TDP1-206ENST00000553569 KNOP1Q1ED39 458 aaKnown RBP24.79■■□□□ 1.56
TDP1-206ENST00000553569 JADE1Q6IE81 842 aa24.79■■□□□ 1.56
TDP1-206ENST00000553569 HS2ST1Q7LGA3 356 aa24.79■■□□□ 1.56
TDP1-206ENST00000553569 HLA-CQ95604 372 aa24.79■■□□□ 1.56
TDP1-206ENST00000553569 B3GALT6Q96L58 329 aa24.79■■□□□ 1.56
TDP1-206ENST00000553569 HSPBP1Q9NZL4 362 aa24.79■■□□□ 1.56
TDP1-206ENST00000553569 HOOK1Q9UJC3 728 aaKnown RBP24.79■■□□□ 1.56
TDP1-206ENST00000553569 SF3B1O75533 1304 aaKnown RBP eCLIP24.79■■□□□ 1.56
TDP1-206ENST00000553569 LINC01565O15544 149 aa24.78■■□□□ 1.56
TDP1-206ENST00000553569 EXTL3O43909 919 aa24.78■■□□□ 1.56
TDP1-206ENST00000553569 IGFBP6P24592 240 aaPredicted RBP24.78■■□□□ 1.56
TDP1-206ENST00000553569 CYP2J2P51589 502 aa24.78■■□□□ 1.56
TDP1-206ENST00000553569 GUCY2FP51841 1108 aa24.78■■□□□ 1.56
TDP1-206ENST00000553569 KCNB1Q14721 858 aa24.78■■□□□ 1.56
TDP1-206ENST00000553569 TMEM132DQ14C87 1099 aa24.78■■□□□ 1.56
TDP1-206ENST00000553569 PTPN14Q15678 1187 aa24.78■■□□□ 1.56
TDP1-206ENST00000553569 CD302Q8IX05 232 aa24.78■■□□□ 1.56
TDP1-206ENST00000553569 RNF168Q8IYW5 571 aaPredicted RBP24.78■■□□□ 1.56
TDP1-206ENST00000553569 GPD1LQ8N335 351 aa24.78■■□□□ 1.56
TDP1-206ENST00000553569 MRPL43Q8N983 215 aaKnown RBP24.78■■□□□ 1.56
TDP1-206ENST00000553569 C3orf58Q8NDZ4 430 aa24.78■■□□□ 1.56
TDP1-206ENST00000553569 DDX27Q96GQ7 796 aaKnown RBP24.78■■□□□ 1.56
TDP1-206ENST00000553569 UBE2ZQ9H832 354 aaPredicted RBP24.78■■□□□ 1.56
TDP1-206ENST00000553569 RBAKQ9NYW8 714 aaPredicted RBP24.78■■□□□ 1.56
TDP1-206ENST00000553569 UBQLN1Q9UMX0 589 aaKnown RBP24.78■■□□□ 1.56
TDP1-206ENST00000553569 XPOTO43592 962 aaKnown RBP24.77■■□□□ 1.56
TDP1-206ENST00000553569 EFEMP2O95967 443 aa24.77■■□□□ 1.56
TDP1-206ENST00000553569 ADRB2P07550 413 aa24.77■■□□□ 1.56
TDP1-206ENST00000553569 GLUD2P49448 558 aa24.77■■□□□ 1.56
TDP1-206ENST00000553569 TFF2Q03403 129 aa24.77■■□□□ 1.56
TDP1-206ENST00000553569 DUSP6Q16828 381 aa24.77■■□□□ 1.56
TDP1-206ENST00000553569 KIAA1841Q6NSI8 718 aa24.77■■□□□ 1.56
TDP1-206ENST00000553569 DCLRE1AQ6PJP8 1040 aa24.77■■□□□ 1.56
TDP1-206ENST00000553569 BRSK2Q8IWQ3 736 aa24.77■■□□□ 1.56
TDP1-206ENST00000553569 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.77■■□□□ 1.56
TDP1-206ENST00000553569 PABPC5Q96DU9 382 aaKnown RBP24.77■■□□□ 1.56
TDP1-206ENST00000553569 MRPL17Q9NRX2 175 aaKnown RBP24.77■■□□□ 1.56
TDP1-206ENST00000553569 COG5Q9UP83 839 aa24.77■■□□□ 1.56
TDP1-206ENST00000553569 TMEM189-UBE2V1I3L0A0 370 aa24.76■■□□□ 1.55
TDP1-206ENST00000553569 KIAA0391O15091 583 aaKnown RBP24.76■■□□□ 1.55
TDP1-206ENST00000553569 IL18RAPO95256 599 aa24.76■■□□□ 1.55
TDP1-206ENST00000553569 SMC2O95347 1197 aa24.76■■□□□ 1.55
TDP1-206ENST00000553569 KCNA5P22460 613 aa24.76■■□□□ 1.55
TDP1-206ENST00000553569 BEST2Q8NFU1 509 aa24.76■■□□□ 1.55
TDP1-206ENST00000553569 SMARCE1Q969G3 411 aa24.76■■□□□ 1.55
TDP1-206ENST00000553569 CDCA3Q99618 268 aaPredicted RBP24.76■■□□□ 1.55
TDP1-206ENST00000553569 ASB7Q9H672 318 aa24.76■■□□□ 1.55
TDP1-206ENST00000553569 MAPK8IP1Q9UQF2 711 aa24.76■■□□□ 1.55
TDP1-206ENST00000553569 BRWD1Q9NSI6 2320 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms