RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 KAT5Q92993 513 aa13.83□□□□□ -0.19
SHMT2-205ENST00000553474 MAGOHBQ96A72 148 aaKnown RBP13.83□□□□□ -0.19
SHMT2-205ENST00000553474 PABPC3Q9H361 631 aaKnown RBP13.83□□□□□ -0.19
SHMT2-205ENST00000553474 FEZ2Q9UHY8 353 aaPredicted RBP13.83□□□□□ -0.19
SHMT2-205ENST00000553474 PPME1Q9Y570 386 aa13.83□□□□□ -0.19
SHMT2-205ENST00000553474 RIPK3Q9Y572 518 aa13.83□□□□□ -0.19
SHMT2-205ENST00000553474 SNCAIPQ9Y6H5 919 aa13.83□□□□□ -0.19
SHMT2-205ENST00000553474 RGS20O76081 388 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 ATG7O95352 703 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 SUPT20HL2P0C7V6 817 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 PTGIRP43119 386 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 CCT5P48643 541 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 ACTR2P61160 394 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 FKBP1BP68106 108 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 PRKCEQ02156 737 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 STRN3Q13033 797 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 PDCLQ13371 301 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 CLEC16AQ2KHT3 1053 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 NOL9Q5SY16 702 aaKnown RBP13.83□□□□□ -0.2
SHMT2-205ENST00000553474 CATSPERGQ6ZRH7 1159 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 SYDE1Q6ZW31 735 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-205ENST00000553474 YTHDF3Q7Z739 585 aaKnown RBP13.83□□□□□ -0.2
SHMT2-205ENST00000553474 SLC13A5Q86YT5 568 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-205ENST00000553474 PRELID2Q8N945 189 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 CHST13Q8NET6 341 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 PPM1EQ8WY54 764 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 BSNDQ8WZ55 320 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 BICD1Q96G01 975 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 VCPIP1Q96JH7 1222 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 DPH5Q9H2P9 285 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 LRRC19Q9H756 370 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 XPNPEP1Q9NQW7 623 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 TMOD4Q9NZQ9 345 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 SEPT9Q9UHD8 586 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-205ENST00000553474 NR2E1Q9Y466 385 aa13.83□□□□□ -0.2
SHMT2-205ENST00000553474 MYO1FO00160 1098 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 FAM107AO95990 144 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 PAEPP09466 180 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 UNGP13051 313 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-205ENST00000553474 NAMPTP43490 491 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 LIG4P49917 911 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 PTP4A2Q12974 167 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 ZNF211Q13398 564 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-205ENST00000553474 BYSLQ13895 437 aaKnown RBP13.82□□□□□ -0.2
SHMT2-205ENST00000553474 PTGISQ16647 500 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 ZACNQ401N2 412 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 NAA35Q5VZE5 725 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 CCDC137Q6PK04 289 aaKnown RBP13.82□□□□□ -0.2
SHMT2-205ENST00000553474 KRT35Q92764 455 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 PGM2Q96G03 612 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 OTUD5Q96G74 571 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 FNBP1Q96RU3 617 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 SH2D3AQ9BRG2 576 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 TRIM51Q9BSJ1 452 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 ERVK-5Q9HDB9 667 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 A1CFQ9NQ94 594 aaKnown RBP13.82□□□□□ -0.2
SHMT2-205ENST00000553474 HOMER3Q9NSC5 361 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 SLC12A6Q9UHW9 1150 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 LCMT1Q9UIC8 334 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.82□□□□□ -0.2
SHMT2-205ENST00000553474 MAFBQ9Y5Q3 323 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-205ENST00000553474 ADGRA3Q8IWK6 1321 aa13.82□□□□□ -0.2
SHMT2-205ENST00000553474 DOCK5Q9H7D0 1870 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 A0A087WUV0 522 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-205ENST00000553474 TMEM88BA6NKF7 163 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 FSCN2O14926 492 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 TBXAS1P24557 533 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-205ENST00000553474 COILP38432 576 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-205ENST00000553474 ATP1A2P50993 1020 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 PMS2P54278 862 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 PPP2R2AP63151 447 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 IFFO1Q0D2I5 559 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 MKRN3Q13064 507 aaKnown RBP13.81□□□□□ -0.2
SHMT2-205ENST00000553474 DGKZQ13574 1117 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 STXBP2Q15833 593 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 CCDC60Q8IWA6 550 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-205ENST00000553474 PSPC1Q8WXF1 523 aaKnown RBP13.81□□□□□ -0.2
SHMT2-205ENST00000553474 TMEM109Q9BVC6 243 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 KIFC3Q9BVG8 833 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 STMN4Q9H169 189 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-205ENST00000553474 PORCNQ9H237 461 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 CNOT8Q9UFF9 292 aaKnown RBP13.81□□□□□ -0.2
SHMT2-205ENST00000553474 LCTP09848 1927 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 DLATP10515 647 aaKnown RBP13.81□□□□□ -0.2
SHMT2-205ENST00000553474 FLT3P36888 993 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 RFC5P40937 340 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 AP3M2P53677 418 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 POLGP54098 1239 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-205ENST00000553474 CENPCQ03188 943 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 GRM1Q13255 1194 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 TMEM132BQ14DG7 1078 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 EMC2Q15006 297 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 KRT71Q3SY84 523 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 DENND2CQ68D51 928 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.81□□□□□ -0.2
SHMT2-205ENST00000553474 GLG1Q92896 1179 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 CENPTQ96BT3 561 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 FAM213AQ9BRX8 229 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 NIFKQ9BYG3 293 aaKnown RBP13.81□□□□□ -0.2
SHMT2-205ENST00000553474 POLR3FQ9H1D9 316 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms