RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 PROB1E7EW31 1015 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 CCL16O15467 120 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 N4BP1O75113 896 aaKnown RBP10.92□□□□□ -0.66
ACTN1-208ENST00000553370 KIF4AO95239 1232 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 C8AP07357 584 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 XRCC6P12956 609 aaKnown RBP eCLIP10.92□□□□□ -0.66
ACTN1-208ENST00000553370 FDPSP14324 419 aaKnown RBP10.92□□□□□ -0.66
ACTN1-208ENST00000553370 TMEM259Q4ZIN3 620 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 RTP2Q5QGT7 225 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 ZC3H14Q6PJT7 736 aaKnown RBP10.92□□□□□ -0.66
ACTN1-208ENST00000553370 MTSS1LQ765P7 747 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 GRASPQ7Z6J2 395 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-208ENST00000553370 NOSTRINQ8IVI9 506 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 ADSSL1Q8N142 457 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 FAM184AQ8NB25 1140 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 ST13P5Q8NFI4 369 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-208ENST00000553370 GPR152Q8TDT2 470 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 TNFRSF25Q93038 417 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 CCDC97Q96F63 343 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-208ENST00000553370 SNX27Q96L92 541 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 RAB34Q9BZG1 259 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 PDZD7Q9H5P4 517 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 CHST7Q9NS84 486 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 ZFP37Q9Y6Q3 630 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-208ENST00000553370 NUMBLQ9Y6R0 609 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 NOTCH4Q99466 2003 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 TICRRQ7Z2Z1 1910 aa10.92□□□□□ -0.66
ACTN1-208ENST00000553370 OTOGLQ3ZCN5 2332 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 TRAPPC3O43617 180 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 PI15O43692 258 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 MED24O75448 989 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 HNRNPA1P09651 372 aaKnown RBP eCLIP10.91□□□□□ -0.66
ACTN1-208ENST00000553370 LAMP2P13473 410 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 CCT6AP40227 531 aaKnown RBP10.91□□□□□ -0.66
ACTN1-208ENST00000553370 NAMPTP43490 491 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 EFNA5P52803 228 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 YARSP54577 528 aaKnown RBP10.91□□□□□ -0.66
ACTN1-208ENST00000553370 HTR4Q13639 388 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 ZNF174Q15697 407 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 ARSIQ5FYB1 569 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 CDCA2Q69YH5 1023 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-208ENST00000553370 DCLRE1AQ6PJP8 1040 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 CATSPER3Q86XQ3 398 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 GPR65Q8IYL9 337 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 RNF168Q8IYW5 571 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-208ENST00000553370 SLC44A3Q8N4M1 653 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 SLC7A14Q8TBB6 771 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 ZNF707Q96C28 371 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-208ENST00000553370 SHDQ96IW2 340 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 POLR3CQ9BUI4 534 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-208ENST00000553370 RHOBTB2Q9BYZ6 727 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 TMEM60Q9H2L4 133 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 FBXW11Q9UKB1 542 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 SPTBN2O15020 2390 aa10.91□□□□□ -0.66
ACTN1-208ENST00000553370 KRBA1A5PL33 1030 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 RCCD1A6NED2 376 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 CCDC169A6NNP5 214 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 WNT7AO00755 349 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 C1RP00736 705 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 DCNP07585 359 aaKnown RBP10.9□□□□□ -0.66
ACTN1-208ENST00000553370 HARSP12081 509 aaKnown RBP10.9□□□□□ -0.66
ACTN1-208ENST00000553370 NPR3P17342 541 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 ORC2Q13416 577 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-208ENST00000553370 FAM187BQ17R55 369 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 GLRA4Q5JXX5 417 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 TTC38Q5R3I4 469 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-208ENST00000553370 CCDC83Q8IWF9 413 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 PIK3R5Q8WYR1 880 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 KIFAP3Q92845 792 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 MTMR9Q96QG7 549 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 PAAF1Q9BRP4 392 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 KIFC3Q9BVG8 833 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 CCDC94Q9BW85 323 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-208ENST00000553370 TOPORSQ9NS56 1045 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-208ENST00000553370 CDH7Q9ULB5 785 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 SIT1Q9Y3P8 196 aa10.9□□□□□ -0.66
ACTN1-208ENST00000553370 ACKR2O00590 384 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 PRRG1O14668 218 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 B3GAT3O94766 335 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 LRG1P02750 347 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 SPATA31C1P0DKV0 1188 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 CYP11B2P19099 503 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 RPA1P27694 616 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 ELF1P32519 619 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 OR1D2P34982 312 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 MATR3P43243 847 aaKnown RBP eCLIP10.89□□□□□ -0.672e-6■■■■□ 26.1
ACTN1-208ENST00000553370 NTHL1P78549 312 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 FOXK2Q01167 660 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 DMP1Q13316 513 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-208ENST00000553370 UBXN2BQ14CS0 331 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 ZRSR1Q15695 479 aaKnown RBP10.89□□□□□ -0.67
ACTN1-208ENST00000553370 ZNF568Q3ZCX4 644 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 PABPC1LQ4VXU2 614 aaKnown RBP10.89□□□□□ -0.67
ACTN1-208ENST00000553370 AXDND1Q5T1B0 1012 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-208ENST00000553370 ATF7IP2Q5U623 682 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 GSTCDQ8NEC7 633 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 SNX29Q8TEQ0 813 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 SPIRE2Q8WWL2 714 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 ING5Q8WYH8 240 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms