RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 SHC3Q92529 594 aa13.69□□□□□ -0.22
CACNB3-223ENST00000552480 ZNF592Q92610 1267 aa13.69□□□□□ -0.22
CACNB3-223ENST00000552480 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
CACNB3-223ENST00000552480 ANKRD36BP1Q96IX9 119 aa13.69□□□□□ -0.22
CACNB3-223ENST00000552480 FAM84AQ96KN4 292 aa13.69□□□□□ -0.22
CACNB3-223ENST00000552480 KREMEN1Q96MU8 473 aa13.69□□□□□ -0.22
CACNB3-223ENST00000552480 C1orf112Q9NSG2 853 aa13.69□□□□□ -0.22
CACNB3-223ENST00000552480 MYO1AQ9UBC5 1043 aa13.69□□□□□ -0.22
CACNB3-223ENST00000552480 GINS2Q9Y248 185 aa13.69□□□□□ -0.22
CACNB3-223ENST00000552480 ATP8B3O60423 1300 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 ANK1P16157 1881 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 A0A087X0T9 212 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 PJA2O43164 708 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 TNNC2P02585 160 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 TMEM191BP0C7N4 346 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 FAM228BP0C875 321 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 CXCL8P10145 99 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 HOXA11P31270 313 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-223ENST00000552480 GRM5P41594 1212 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 OSTNP61366 133 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 GNG11P61952 73 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 MRPS6P82932 125 aaKnown RBP13.68□□□□□ -0.22
CACNB3-223ENST00000552480 PTPN11Q06124 597 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-223ENST00000552480 BMS1Q14692 1282 aaKnown RBP13.68□□□□□ -0.22
CACNB3-223ENST00000552480 CCDC122Q5T0U0 273 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 C10orf76Q5T2E6 689 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 GDF6Q6KF10 455 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-223ENST00000552480 TRAPPC11Q7Z392 1133 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 RPAINQ86UA6 219 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 TMEM192Q8IY95 271 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 FAM71AQ8IYT1 594 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 KAT5Q92993 513 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 TATDN2Q93075 761 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 PI4K2AQ9BTU6 479 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.68□□□□□ -0.22
CACNB3-223ENST00000552480 MTMR12Q9C0I1 747 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 ASB7Q9H672 318 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 DNAI1Q9UI46 699 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 NENFQ9UMX5 172 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 R3HCC1Q9Y3T6 440 aaKnown RBP13.68□□□□□ -0.22
CACNB3-223ENST00000552480 TRPV2Q9Y5S1 764 aa13.68□□□□□ -0.22
CACNB3-223ENST00000552480 MROH7Q68CQ1 1323 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 FRMPD3Q5JV73 1810 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 RCCD1A6NED2 376 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 LACTBL1A8MY62 500 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 M0QZ92 97 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 NPTXRO95502 500 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 GRK4P32298 578 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 KIF5AQ12840 1032 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 NCOA4Q13772 614 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 FAM47CQ5HY64 1035 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 SMYD5Q6GMV2 418 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 SERINC5Q86VE9 423 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 CD302Q8IX05 232 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 EFCAB13Q8IY85 973 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 OLIG1Q8TAK6 271 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 TMEM40Q8WWA1 233 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 TSEN34Q9BSV6 310 aaKnown RBP13.67□□□□□ -0.22
CACNB3-223ENST00000552480 SYT11Q9BT88 431 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 CCDC94Q9BW85 323 aaPredicted RBP13.67□□□□□ -0.22
CACNB3-223ENST00000552480 CELF4Q9BZC1 486 aaKnown RBP13.67□□□□□ -0.22
CACNB3-223ENST00000552480 IMPG2Q9BZV3 1241 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 LACRTQ9GZZ8 138 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 HMX1Q9NP08 348 aaPredicted RBP13.67□□□□□ -0.22
CACNB3-223ENST00000552480 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.67□□□□□ -0.22
CACNB3-223ENST00000552480 ADAMTS1Q9UHI8 967 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 GUCA1BQ9UMX6 200 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 RALGAPA2Q2PPJ7 1873 aa13.67□□□□□ -0.22
CACNB3-223ENST00000552480 MOXD2PA6NHM9 499 aa13.66□□□□□ -0.22
CACNB3-223ENST00000552480 MEFVO15553 781 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-223ENST00000552480 ABL1P00519 1130 aa13.66□□□□□ -0.22
CACNB3-223ENST00000552480 MYCNP04198 464 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-223ENST00000552480 TBXAS1P24557 533 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-223ENST00000552480 CASQ1P31415 396 aa13.66□□□□□ -0.22
CACNB3-223ENST00000552480 ACLYP53396 1101 aa13.66□□□□□ -0.22
CACNB3-223ENST00000552480 NOP14P78316 857 aaKnown RBP13.66□□□□□ -0.22
CACNB3-223ENST00000552480 TFAMQ00059 246 aaKnown RBP13.66□□□□□ -0.22
CACNB3-223ENST00000552480 NAB2Q15742 525 aa13.66□□□□□ -0.22
CACNB3-223ENST00000552480 SLC10A6Q3KNW5 377 aa13.66□□□□□ -0.22
CACNB3-223ENST00000552480 NT5DC4Q86YG4 428 aa13.66□□□□□ -0.22
CACNB3-223ENST00000552480 SLC30A5Q8TAD4 765 aa13.66□□□□□ -0.22
CACNB3-223ENST00000552480 DHX38Q92620 1227 aaKnown RBP13.66□□□□□ -0.22
CACNB3-223ENST00000552480 ACAP3Q96P50 834 aa13.66□□□□□ -0.22
CACNB3-223ENST00000552480 WDR24Q96S15 920 aa13.66□□□□□ -0.22
CACNB3-223ENST00000552480 APOBEC3GQ9HC16 384 aaKnown RBP13.66□□□□□ -0.22
CACNB3-223ENST00000552480 PTCH2Q9Y6C5 1203 aa13.66□□□□□ -0.22
CACNB3-223ENST00000552480 CDY2AQ9Y6F7 541 aa13.66□□□□□ -0.22
CACNB3-223ENST00000552480 GRIN2DO15399 1336 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 DDX3XO00571 662 aaKnown RBP eCLIP13.65□□□□□ -0.22
CACNB3-223ENST00000552480 ASS1P00966 412 aaKnown RBP13.65□□□□□ -0.22
CACNB3-223ENST00000552480 NFICP08651 508 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 USP8P40818 1118 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 TRPC3Q13507 836 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 CUL2Q13617 745 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 SGSM1Q2NKQ1 1148 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 ZNF569Q5MCW4 686 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 LHX8Q68G74 356 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 JADE1Q6IE81 842 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 SPOPLQ6IQ16 392 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 ALKBH5Q6P6C2 394 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms