RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 JADE1Q6IE81 842 aa16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 POF1BQ8WVV4 589 aa16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 KIF12Q96FN5 646 aa16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 GAS2L1Q99501 681 aaPredicted RBP16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 COLEC11Q9BWP8 271 aa16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 VN1R3Q9BXE9 311 aa16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 DMAC2Q9NW81 257 aa16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 MARCH5Q9NX47 278 aa16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 TUBGCP4Q9UGJ1 667 aa16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 PCDHGC5Q9Y5F6 944 aa16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 MTCH2Q9Y6C9 303 aa16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 KIF20AO95235 890 aa16.47■□□□□ 0.23
SMARCD1-211ENST00000551497 NFICP08651 508 aa16.47■□□□□ 0.23
SMARCD1-211ENST00000551497 CLCNKBP51801 687 aa16.47■□□□□ 0.23
SMARCD1-211ENST00000551497 KRT17Q04695 432 aa16.47■□□□□ 0.23
SMARCD1-211ENST00000551497 TAS1R1Q7RTX1 841 aa16.47■□□□□ 0.23
SMARCD1-211ENST00000551497 C12orf56Q8IXR9 622 aa16.47■□□□□ 0.23
SMARCD1-211ENST00000551497 ADSSL1Q8N142 457 aa16.47■□□□□ 0.23
SMARCD1-211ENST00000551497 XXYLT1Q8NBI6 393 aa16.47■□□□□ 0.23
SMARCD1-211ENST00000551497 FAM84AQ96KN4 292 aa16.47■□□□□ 0.23
SMARCD1-211ENST00000551497 FBXL18Q96ME1 805 aa16.47■□□□□ 0.23
SMARCD1-211ENST00000551497 NUP62CLQ9H1M0 184 aa16.47■□□□□ 0.23
SMARCD1-211ENST00000551497 PDE11AQ9HCR9 933 aa16.47■□□□□ 0.23
SMARCD1-211ENST00000551497 RBAKQ9NYW8 714 aaPredicted RBP16.47■□□□□ 0.23
SMARCD1-211ENST00000551497 CGNQ9P2M7 1197 aaKnown RBP16.47■□□□□ 0.23
SMARCD1-211ENST00000551497 TRAF3IP3Q9Y228 551 aa16.47■□□□□ 0.23
SMARCD1-211ENST00000551497 PLXNA4Q9HCM2 1894 aa16.47■□□□□ 0.23
SMARCD1-211ENST00000551497 PRRC2BQ5JSZ5 2229 aaKnown RBP16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 ANK1P16157 1881 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 ZNF233A6NK53 670 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 PPP1R3GB7ZBB8 358 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 KIAA0391O15091 583 aaKnown RBP16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 NR3C1P04150 777 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 FOSL2P15408 326 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 POU3F3P20264 500 aaPredicted RBP16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 IRS1P35568 1242 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 PPM1AP35813 382 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 CASP4P49662 377 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 PMS1P54277 932 aaKnown RBP16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 POU5F1Q01860 360 aaKnown RBP16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 HSP90AA2PQ14568 343 aaPredicted RBP16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 SCARA3Q6AZY7 606 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 CD300LGQ6UXG3 332 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 BRSK2Q8IWQ3 736 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 CD302Q8IX05 232 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 GOLGA5Q8TBA6 731 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 HASPINQ8TF76 798 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 TMEM169Q96HH4 297 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 ASB7Q9H672 318 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 SLC38A7Q9NVC3 462 aa16.46■□□□□ 0.23
SMARCD1-211ENST00000551497 CALUO43852 315 aaPredicted RBP16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 EXOC3O60645 756 aa16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 TADA2AO75478 443 aa16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 KIF4AO95239 1232 aa16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 TMEM132DQ14C87 1099 aa16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 CCDC85BQ15834 202 aaPredicted RBP16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 SNRNP35Q16560 246 aaKnown RBP16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 UPP1Q16831 310 aa16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 ZCWPW2Q504Y3 356 aa16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 COBLL1Q53SF7 1204 aa16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 ANKRD40Q6AI12 368 aa16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 CENPPQ6IPU0 288 aa16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 DCLRE1AQ6PJP8 1040 aa16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 DDX53Q86TM3 631 aaKnown RBP16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 SLC9A9Q8IVB4 645 aa16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 EFCAB13Q8IY85 973 aa16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 MICAL1Q8TDZ2 1067 aa16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 MRPL38Q96DV4 380 aaKnown RBP16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 EEF2KMTQ96G04 330 aa16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 GPR62Q9BZJ7 368 aa16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 KIAA1586Q9HCI6 787 aa16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 PUF60Q9UHX1 559 aaKnown RBP16.45■□□□□ 0.22
SMARCD1-211ENST00000551497 PDCD11Q14690 1871 aaKnown RBP16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 COL4A4P53420 1690 aaPredicted RBP16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 B3GAT3O94766 335 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 IL18RAPO95256 599 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 EFEMP2O95967 443 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 UBE3AQ05086 875 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 PTPROQ16827 1216 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 SPATA1Q5VX52 437 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 KLHL10Q6JEL2 608 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 VPS52Q8N1B4 723 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 MICALL1Q8N3F8 863 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 C3orf58Q8NDZ4 430 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 AUTS2Q8WXX7 1259 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 PPM1EQ8WY54 764 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 CCDC127Q96BQ5 260 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 DDX27Q96GQ7 796 aaKnown RBP16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 B3GALT6Q96L58 329 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 MFSD14AQ96MC6 490 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 POP1Q99575 1024 aaKnown RBP16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 GTPBP4Q9BZE4 634 aaKnown RBP16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 LMAN2LQ9H0V9 348 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 LMCD1Q9NZU5 365 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 UBQLN1Q9UMX0 589 aaKnown RBP16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 LZTS1Q9Y250 596 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 DERAQ9Y315 318 aa16.44■□□□□ 0.22
SMARCD1-211ENST00000551497 TRIM49BA6NDI0 452 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 PODXLO00592 558 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 PPEF2O14830 753 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms