RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 MTERF2Q49AM1 385 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 PDXDC1Q6P996 788 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 CATIPQ7Z7H3 387 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 CAMK1GQ96NX5 476 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 SH2D3AQ9BRG2 576 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 ZNF577Q9BSK1 485 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 EIF2AQ9BY44 585 aaKnown RBP12.62□□□□□ -0.39
GPN3-208ENST00000550974 CHMP4BQ9H444 224 aaKnown RBP12.62□□□□□ -0.39
GPN3-208ENST00000550974 TRPV4Q9HBA0 871 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 IFT122Q9HBG6 1241 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 FSCN3Q9NQT6 498 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 DKK4Q9UBT3 224 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 STK24Q9Y6E0 443 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 CDY1Q9Y6F8 540 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 FAM86B1E9PN63 330 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 PRRG1O14668 218 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 RNF40O75150 1001 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 APBB3O95704 486 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 NTRK1P04629 796 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 FAM86B2P0C5J1 330 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 MYL4P12829 197 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 BCKDHBP21953 392 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 ELF1P32519 619 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 HNRNPDQ14103 355 aaKnown RBP12.61□□□□□ -0.39
GPN3-208ENST00000550974 USP39Q53GS9 565 aaKnown RBP12.61□□□□□ -0.39
GPN3-208ENST00000550974 NIPA1Q7RTP0 329 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 C11orf74Q86VG3 221 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 HS6ST3Q8IZP7 471 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 CMTR1Q8N1G2 835 aaKnown RBP12.61□□□□□ -0.39
GPN3-208ENST00000550974 E2F7Q96AV8 911 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 TMEM209Q96SK2 561 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 TPSD1Q9BZJ3 242 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 SLITRK6Q9H5Y7 841 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 PRORYQ9H606 182 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 TBC1D22BQ9NU19 505 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 SEPT9Q9UHD8 586 aaPredicted RBP12.61□□□□□ -0.39
GPN3-208ENST00000550974 PCDHB9Q9Y5E1 797 aa12.61□□□□□ -0.39
GPN3-208ENST00000550974 ASCC3Q8N3C0 2202 aaKnown RBP12.61□□□□□ -0.39
GPN3-208ENST00000550974 ARHGEF37A1IGU5 675 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 TMEM150BA6NC51 233 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 OPHN1O60890 802 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 MOSPD3O75425 235 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 KIF4AO95239 1232 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 AKAP5P24588 427 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 ITPKBP27987 946 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 TNK2Q07912 1038 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 FCHO2Q0JRZ9 810 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 GRSF1Q12849 480 aaKnown RBP eCLIP12.6□□□□□ -0.39
GPN3-208ENST00000550974 TEAD2Q15562 447 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 TARBP2Q15633 366 aaKnown RBP12.6□□□□□ -0.39
GPN3-208ENST00000550974 MAPK6Q16659 721 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 UGCGQ16739 394 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 FSTL4Q6MZW2 842 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 ARMCX6Q7L4S7 300 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 HAUS6Q7Z4H7 955 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 HEATR3Q7Z4Q2 680 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 FAM181AQ8N9Y4 354 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 GSTCDQ8NEC7 633 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 CTCFLQ8NI51 663 aaPredicted RBP12.6□□□□□ -0.39
GPN3-208ENST00000550974 ANO3Q9BYT9 981 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 MINDY3Q9H8M7 445 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 TMEM74BQ9NUR3 256 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 KLK14Q9P0G3 267 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 EBF1Q9UH73 591 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 GIT1Q9Y2X7 761 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 MYO18BQ8IUG5 2567 aa12.6□□□□□ -0.39
GPN3-208ENST00000550974 ZNF462Q96JM2 2506 aa12.59□□□□□ -0.39
GPN3-208ENST00000550974 NUP205Q92621 2012 aa12.59□□□□□ -0.39
GPN3-208ENST00000550974 PLXNB3Q9ULL4 1909 aa12.59□□□□□ -0.39
GPN3-208ENST00000550974 IGKV6-21A0A0C4DH24 114 aa12.59□□□□□ -0.39
GPN3-208ENST00000550974 CASTOR2A6NHX0 329 aa12.59□□□□□ -0.39
GPN3-208ENST00000550974 WISP1O95388 367 aa12.59□□□□□ -0.39
GPN3-208ENST00000550974 PLEKHA8P1O95397 391 aa12.59□□□□□ -0.39
GPN3-208ENST00000550974 CFIP05156 583 aa12.59□□□□□ -0.39
GPN3-208ENST00000550974 GRIK3Q13003 919 aa12.59□□□□□ -0.39
GPN3-208ENST00000550974 SRBD1Q8N5C6 995 aaKnown RBP12.59□□□□□ -0.39
GPN3-208ENST00000550974 FCRL3Q96P31 734 aaPredicted RBP12.59□□□□□ -0.39
GPN3-208ENST00000550974 CYP4F11Q9HBI6 524 aa12.59□□□□□ -0.39
GPN3-208ENST00000550974 MTRRQ9UBK8 725 aa12.59□□□□□ -0.39
GPN3-208ENST00000550974 PCNX2A6NKB5 2137 aa12.59□□□□□ -0.39
GPN3-208ENST00000550974 MYH9P35579 1960 aaKnown RBP12.58□□□□□ -0.4
GPN3-208ENST00000550974 IGLV3-22A0A075B6J6 115 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 TRABD2BA6NFA1 517 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 WDR64B1ANS9 1081 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 SH3BP5O60239 455 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 FOSP01100 380 aaPredicted RBP12.58□□□□□ -0.4
GPN3-208ENST00000550974 EGFP01133 1207 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 SRGAP2CP0DJJ0 459 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 CD59P13987 128 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 SMARCA1P28370 1054 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 SREBF1P36956 1147 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 DMC1Q14565 340 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 ARHGAP29Q52LW3 1261 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 TMEM196Q5HYL7 178 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 IQCEQ6IPM2 695 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 TOGARAM2Q6ZUX3 1019 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 SRGAP1Q7Z6B7 1085 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 MARCH9Q86YJ5 346 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 OR2I1PQ8NGU4 316 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 LRRC3BQ96PB8 259 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms