RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 PEX2P28328 305 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 PRDX5P30044 214 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 TXKP42681 527 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 ALDH1A3P47895 512 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 PTH1RQ03431 593 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 FLYWCH1Q4VC44 716 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 FRMD5Q7Z6J6 570 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 COL23A1Q86Y22 540 aaPredicted RBP6.12□□□□□ -1.43
LIMA1-205ENST00000550592 FAM90A1Q86YD7 464 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 C1QL4Q86Z23 238 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 LRRC56Q8IYG6 542 aaPredicted RBP6.12□□□□□ -1.43
LIMA1-205ENST00000550592 DCBLD1Q8N8Z6 715 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 IL17RDQ8NFM7 739 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 ANKS1AQ92625 1134 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 LMF1Q96S06 567 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 STRBPQ96SI9 672 aaKnown RBP6.12□□□□□ -1.43
LIMA1-205ENST00000550592 DPYSL5Q9BPU6 564 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 C22orf23Q9BZE7 217 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 PEG3Q9GZU2 1588 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 C12orf65Q9H3J6 166 aaKnown RBP6.12□□□□□ -1.43
LIMA1-205ENST00000550592 ZMAT3Q9HA38 289 aaKnown RBP6.12□□□□□ -1.43
LIMA1-205ENST00000550592 SIDT1Q9NXL6 827 aaKnown RBP6.12□□□□□ -1.43
LIMA1-205ENST00000550592 PCDHGB6Q9Y5F9 930 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 A0A1W2PRX2 142 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 PJA2O43164 708 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 PHGDHO43175 533 aaKnown RBP6.11□□□□□ -1.43
LIMA1-205ENST00000550592 CDC14BO60729 498 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 TRIM13O60858 407 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 IFIT2P09913 472 aaKnown RBP6.11□□□□□ -1.43
LIMA1-205ENST00000550592 MYF5P13349 255 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 DUSP8Q13202 625 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 POLD3Q15054 466 aaPredicted RBP6.11□□□□□ -1.43
LIMA1-205ENST00000550592 BRD3Q15059 726 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 ATP2B3Q16720 1220 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 SLFN13Q68D06 897 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 APOA5Q6Q788 366 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 FAM111BQ6SJ93 734 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 SEM1Q6ZVN7 128 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 SH2D3CQ8N5H7 860 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 MRI1Q9BV20 369 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 C11orf54Q9H0W9 315 aaPredicted RBP6.11□□□□□ -1.43
LIMA1-205ENST00000550592 NUP62CLQ9H1M0 184 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 MRPL46Q9H2W6 279 aaKnown RBP6.11□□□□□ -1.43
LIMA1-205ENST00000550592 KLHL11Q9NVR0 708 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 FAM30AQ9NZY2 134 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 SLC23A1Q9UHI7 598 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 FEZ2Q9UHY8 353 aaPredicted RBP6.11□□□□□ -1.43
LIMA1-205ENST00000550592 PHTF1Q9UMS5 762 aa6.11□□□□□ -1.43
LIMA1-205ENST00000550592 ADGRL1O94910 1474 aa6.1□□□□□ -1.43
LIMA1-205ENST00000550592 CXorf49A8MYA2 514 aaPredicted RBP6.1□□□□□ -1.43
LIMA1-205ENST00000550592 B5MCH6 92 aa6.1□□□□□ -1.43
LIMA1-205ENST00000550592 MGEA5O60502 916 aa6.1□□□□□ -1.43
LIMA1-205ENST00000550592 PQBP1O60828 265 aaKnown RBP6.1□□□□□ -1.43
LIMA1-205ENST00000550592 STC2O76061 302 aa6.1□□□□□ -1.43
LIMA1-205ENST00000550592 RPS19P39019 145 aaKnown RBP6.1□□□□□ -1.43
LIMA1-205ENST00000550592 OS9Q13438 667 aaPredicted RBP6.1□□□□□ -1.43
LIMA1-205ENST00000550592 PABPC1LQ4VXU2 614 aaKnown RBP6.1□□□□□ -1.43
LIMA1-205ENST00000550592 PPP1R3BQ86XI6 285 aa6.1□□□□□ -1.43
LIMA1-205ENST00000550592 SYT8Q8NBV8 401 aa6.1□□□□□ -1.43
LIMA1-205ENST00000550592 IL31RAQ8NI17 732 aa6.1□□□□□ -1.43
LIMA1-205ENST00000550592 SLC35B2Q8TB61 432 aa6.1□□□□□ -1.43
LIMA1-205ENST00000550592 ARL8AQ96BM9 186 aa6.1□□□□□ -1.43
LIMA1-205ENST00000550592 APIPQ96GX9 242 aa6.1□□□□□ -1.43
LIMA1-205ENST00000550592 ZNF512Q96ME7 567 aaPredicted RBP6.1□□□□□ -1.43
LIMA1-205ENST00000550592 MPHOSPH6Q99547 160 aaKnown RBP6.1□□□□□ -1.43
LIMA1-205ENST00000550592 MYOCQ99972 504 aa6.1□□□□□ -1.43
LIMA1-205ENST00000550592 MEGF9Q9H1U4 602 aa6.1□□□□□ -1.43
LIMA1-205ENST00000550592 USP40Q9NVE5 1235 aa6.1□□□□□ -1.43
LIMA1-205ENST00000550592 STAP2Q9UGK3 403 aa6.1□□□□□ -1.43
LIMA1-205ENST00000550592 TPCN1Q9ULQ1 816 aa6.1□□□□□ -1.43
LIMA1-205ENST00000550592 RUVBL1Q9Y265 456 aaKnown RBP6.1□□□□□ -1.43
LIMA1-205ENST00000550592 PCDHA1Q9Y5I3 950 aa6.1□□□□□ -1.43
LIMA1-205ENST00000550592 AQRO60306 1485 aaKnown RBP eCLIP6.09□□□□□ -1.43
LIMA1-205ENST00000550592 PNPLA7Q6ZV29 1317 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 A0A1W2PPL8 197 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 DBX1A6NMT0 343 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 TBKBP1A7MCY6 615 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 GRM6O15303 877 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 LAMTOR5O43504 91 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 CD1AP06126 327 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 SNRPA1P09661 255 aaKnown RBP6.09□□□□□ -1.43
LIMA1-205ENST00000550592 RAP2AP10114 183 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 MTHFD1P11586 935 aaKnown RBP6.09□□□□□ -1.43
LIMA1-205ENST00000550592 RPL17P18621 184 aaKnown RBP6.09□□□□□ -1.43
LIMA1-205ENST00000550592 ATP5JP18859 108 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 HTR3AP46098 478 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 AK2P54819 239 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 CREMQ03060 361 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 BMT2Q1RMZ1 405 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 EMC10Q5UCC4 262 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 DOK3Q7L591 496 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 TAX1BP1Q86VP1 789 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 ZSCAN18Q8TBC5 510 aaPredicted RBP6.09□□□□□ -1.43
LIMA1-205ENST00000550592 MRGPRX1Q96LB2 322 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 LRRC37BQ96QE4 947 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 ELAC2Q9BQ52 826 aaKnown RBP6.09□□□□□ -1.43
LIMA1-205ENST00000550592 PLA2G12BQ9BX93 195 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 LRRC27Q9C0I9 530 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 SARS2Q9NP81 518 aaKnown RBP6.09□□□□□ -1.43
LIMA1-205ENST00000550592 GNL3LQ9NVN8 582 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms