RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 NSUN3Q9H649 340 aaKnown RBP21.05■□□□□ 0.96
DDX54-207ENST00000550016 LMBRD1Q9NUN5 540 aa21.05■□□□□ 0.96
DDX54-207ENST00000550016 MARCH5Q9NX47 278 aa21.05■□□□□ 0.96
DDX54-207ENST00000550016 CACNG4Q9UBN1 327 aa21.05■□□□□ 0.96
DDX54-207ENST00000550016 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.05■□□□□ 0.96
DDX54-207ENST00000550016 GOLGA8IPA6NC78 632 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 GOLGA8JA6NMD2 632 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 FSCN2O14926 492 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 CSPG5O95196 566 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 IRS1P35568 1242 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 SOX4Q06945 474 aaPredicted RBP21.04■□□□□ 0.96
DDX54-207ENST00000550016 SPAG1Q07617 926 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 BMS1Q14692 1282 aaKnown RBP21.04■□□□□ 0.96
DDX54-207ENST00000550016 ZBTB6Q15916 424 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 TMC7Q7Z402 723 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 VPS52Q8N1B4 723 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 GPD1LQ8N335 351 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 ZSWIM2Q8NEG5 633 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 ERCC4Q92889 916 aaPredicted RBP21.04■□□□□ 0.96
DDX54-207ENST00000550016 C18orf25Q96B23 403 aaPredicted RBP21.04■□□□□ 0.96
DDX54-207ENST00000550016 KIF12Q96FN5 646 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 DDX27Q96GQ7 796 aaKnown RBP21.04■□□□□ 0.96
DDX54-207ENST00000550016 GTPBP4Q9BZE4 634 aaKnown RBP21.04■□□□□ 0.96
DDX54-207ENST00000550016 KCTD10Q9H3F6 313 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 ASB7Q9H672 318 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 KIAA1586Q9HCI6 787 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 NGRNQ9NPE2 291 aaKnown RBP21.04■□□□□ 0.96
DDX54-207ENST00000550016 ENTPD7Q9NQZ7 604 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 HSPBP1Q9NZL4 362 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 ADAM28Q9UKQ2 775 aa21.04■□□□□ 0.96
DDX54-207ENST00000550016 F8W810 466 aa21.03■□□□□ 0.96
DDX54-207ENST00000550016 CLIC2O15247 247 aa21.03■□□□□ 0.96
DDX54-207ENST00000550016 XPOTO43592 962 aaKnown RBP21.03■□□□□ 0.96
DDX54-207ENST00000550016 TADA2AO75478 443 aa21.03■□□□□ 0.96
DDX54-207ENST00000550016 IL18RAPO95256 599 aa21.03■□□□□ 0.96
DDX54-207ENST00000550016 SLC34A2O95436 690 aa21.03■□□□□ 0.96
DDX54-207ENST00000550016 RPL9P32969 192 aaKnown RBP21.03■□□□□ 0.96
DDX54-207ENST00000550016 DCLRE1AQ6PJP8 1040 aa21.03■□□□□ 0.96
DDX54-207ENST00000550016 C12orf56Q8IXR9 622 aa21.03■□□□□ 0.96
DDX54-207ENST00000550016 GUF1Q8N442 669 aaKnown RBP21.03■□□□□ 0.96
DDX54-207ENST00000550016 NOC3LQ8WTT2 800 aaKnown RBP21.03■□□□□ 0.96
DDX54-207ENST00000550016 TCF25Q9BQ70 676 aa21.03■□□□□ 0.96
DDX54-207ENST00000550016 VN1R3Q9BXE9 311 aa21.03■□□□□ 0.96
DDX54-207ENST00000550016 GOLGA2P5Q9HBQ8 144 aa21.03■□□□□ 0.96
DDX54-207ENST00000550016 DERAQ9Y315 318 aa21.03■□□□□ 0.96
DDX54-207ENST00000550016 VWA8A3KMH1 1905 aa21.02■□□□□ 0.96
DDX54-207ENST00000550016 ZNF233A6NK53 670 aa21.02■□□□□ 0.96
DDX54-207ENST00000550016 GOLGA6L22H0YM25 854 aa21.02■□□□□ 0.96
DDX54-207ENST00000550016 PDXKO00764 312 aa21.02■□□□□ 0.96
DDX54-207ENST00000550016 EFEMP2O95967 443 aa21.02■□□□□ 0.96
DDX54-207ENST00000550016 CYP3A5P20815 502 aa21.02■□□□□ 0.96
DDX54-207ENST00000550016 CLCNKBP51801 687 aa21.02■□□□□ 0.96
DDX54-207ENST00000550016 UPP1Q16831 310 aa21.02■□□□□ 0.96
DDX54-207ENST00000550016 TCEAL5Q5H9L2 206 aa21.02■□□□□ 0.96
DDX54-207ENST00000550016 ZNF658Q5TYW1 1059 aaPredicted RBP21.02■□□□□ 0.96
DDX54-207ENST00000550016 JADE1Q6IE81 842 aa21.02■□□□□ 0.96
DDX54-207ENST00000550016 BRSK2Q8IWQ3 736 aa21.02■□□□□ 0.96
DDX54-207ENST00000550016 PPP2R3CQ969Q6 453 aa21.02■□□□□ 0.96
DDX54-207ENST00000550016 ZBP1Q9H171 429 aa21.02■□□□□ 0.96
DDX54-207ENST00000550016 RBAKQ9NYW8 714 aaPredicted RBP21.02■□□□□ 0.96
DDX54-207ENST00000550016 UBQLN1Q9UMX0 589 aaKnown RBP21.02■□□□□ 0.96
DDX54-207ENST00000550016 MAPK8IP1Q9UQF2 711 aa21.02■□□□□ 0.96
DDX54-207ENST00000550016 TMEM189-UBE2V1I3L0A0 370 aa21.01■□□□□ 0.95
DDX54-207ENST00000550016 KIF4AO95239 1232 aa21.01■□□□□ 0.95
DDX54-207ENST00000550016 CXCL14O95715 111 aa21.01■□□□□ 0.95
DDX54-207ENST00000550016 CTSAP10619 480 aa21.01■□□□□ 0.95
DDX54-207ENST00000550016 CYP2J2P51589 502 aa21.01■□□□□ 0.95
DDX54-207ENST00000550016 SMC1AQ14683 1233 aaKnown RBP21.01■□□□□ 0.95
DDX54-207ENST00000550016 TMEM132DQ14C87 1099 aa21.01■□□□□ 0.95
DDX54-207ENST00000550016 PLPP4Q5VZY2 271 aa21.01■□□□□ 0.95
DDX54-207ENST00000550016 FUT10Q6P4F1 479 aa21.01■□□□□ 0.95
DDX54-207ENST00000550016 XXYLT1Q8NBI6 393 aa21.01■□□□□ 0.95
DDX54-207ENST00000550016 FBXL18Q96ME1 805 aa21.01■□□□□ 0.95
DDX54-207ENST00000550016 TUBGCP4Q9UGJ1 667 aa21.01■□□□□ 0.95
DDX54-207ENST00000550016 C2CD2Q9Y426 696 aa21.01■□□□□ 0.95
DDX54-207ENST00000550016 PCDHGC5Q9Y5F6 944 aa21.01■□□□□ 0.95
DDX54-207ENST00000550016 SCN1AP35498 2009 aa21■□□□□ 0.95
DDX54-207ENST00000550016 BRWD1Q9NSI6 2320 aa21■□□□□ 0.95
DDX54-207ENST00000550016 PODXLO00592 558 aa21■□□□□ 0.95
DDX54-207ENST00000550016 B3GAT3O94766 335 aa21■□□□□ 0.95
DDX54-207ENST00000550016 SOD2P04179 222 aa21■□□□□ 0.95
DDX54-207ENST00000550016 NFICP08651 508 aa21■□□□□ 0.95
DDX54-207ENST00000550016 LRPAP1P30533 357 aa21■□□□□ 0.95
DDX54-207ENST00000550016 COBLL1Q53SF7 1204 aa21■□□□□ 0.95
DDX54-207ENST00000550016 SPATA1Q5VX52 437 aa21■□□□□ 0.95
DDX54-207ENST00000550016 TAS1R1Q7RTX1 841 aa21■□□□□ 0.95
DDX54-207ENST00000550016 NT5DC4Q86YG4 428 aa21■□□□□ 0.95
DDX54-207ENST00000550016 SLC9A9Q8IVB4 645 aa21■□□□□ 0.95
DDX54-207ENST00000550016 SMYD4Q8IYR2 804 aaPredicted RBP21■□□□□ 0.95
DDX54-207ENST00000550016 RNF168Q8IYW5 571 aaPredicted RBP21■□□□□ 0.95
DDX54-207ENST00000550016 MRPL43Q8N983 215 aaKnown RBP21■□□□□ 0.95
DDX54-207ENST00000550016 BEST2Q8NFU1 509 aa21■□□□□ 0.95
DDX54-207ENST00000550016 TMEM174Q8WUU8 243 aa21■□□□□ 0.95
DDX54-207ENST00000550016 HERC2P3Q9BVR0 1158 aa21■□□□□ 0.95
DDX54-207ENST00000550016 GPR62Q9BZJ7 368 aa21■□□□□ 0.95
DDX54-207ENST00000550016 DMAC2Q9NW81 257 aa21■□□□□ 0.95
DDX54-207ENST00000550016 MAN1B1Q9UKM7 699 aa21■□□□□ 0.95
DDX54-207ENST00000550016 SF3B1O75533 1304 aaKnown RBP eCLIP21■□□□□ 0.956e-11■■■■■ 199.8
DDX54-207ENST00000550016 REV3LO60673 3130 aa21■□□□□ 0.95
DDX54-207ENST00000550016 CALUO43852 315 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms