RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 ZNF568Q3ZCX4 644 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 PEX26Q7Z412 305 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 WDR49Q8IV35 697 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 FAM212AQ96EL1 285 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 APOBEC3GQ9HC16 384 aaKnown RBP20.57■□□□□ 0.88
BRF1-215ENST00000549655 ARFGAP3Q9NP61 516 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 AKT3Q9Y243 479 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 TUBBP07437 444 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 TMOD1P28289 359 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 AP3M2P53677 418 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 TNFAIP2Q03169 654 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 MAP2K5Q13163 448 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 MTHFD1LQ6UB35 978 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 DDX1Q92499 740 aaKnown RBP20.57■□□□□ 0.88
BRF1-215ENST00000549655 PPP1R16BQ96T49 567 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 ZCCHC17Q9NP64 241 aaKnown RBP20.57■□□□□ 0.88
BRF1-215ENST00000549655 PRMT7Q9NVM4 692 aaPredicted RBP20.57■□□□□ 0.88
BRF1-215ENST00000549655 A0A087WZ62 844 aa20.56■□□□□ 0.88
BRF1-215ENST00000549655 BUB1BO60566 1050 aaPredicted RBP20.56■□□□□ 0.88
BRF1-215ENST00000549655 VSNL1P62760 191 aa20.56■□□□□ 0.88
BRF1-215ENST00000549655 PPFIA1Q13136 1202 aa20.56■□□□□ 0.88
BRF1-215ENST00000549655 NCOA4Q13772 614 aa20.56■□□□□ 0.88
BRF1-215ENST00000549655 PRAMEF19Q5SWL8 479 aa20.56■□□□□ 0.88
BRF1-215ENST00000549655 EEF1DP3Q658K8 133 aa20.56■□□□□ 0.88
BRF1-215ENST00000549655 CDR2LQ86X02 465 aaPredicted RBP20.56■□□□□ 0.88
BRF1-215ENST00000549655 THNSL1Q8IYQ7 743 aa20.56■□□□□ 0.88
BRF1-215ENST00000549655 MMGT1Q8N4V1 131 aa20.56■□□□□ 0.88
BRF1-215ENST00000549655 FDXACB1Q9BRP7 624 aaPredicted RBP20.56■□□□□ 0.88
BRF1-215ENST00000549655 TNFSF13BQ9Y275 285 aa20.56■□□□□ 0.88
BRF1-215ENST00000549655 STXBP5LQ9Y2K9 1186 aa20.56■□□□□ 0.88
BRF1-215ENST00000549655 KCNK3O14649 394 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 VTNP04004 478 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 NOP14P78316 857 aaKnown RBP20.55■□□□□ 0.88
BRF1-215ENST00000549655 GPC5P78333 572 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 CUL2Q13617 745 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 GRIK4Q16099 956 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 SAPCD2Q86UD0 394 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 NT5DC3Q86UY8 548 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 RHOT2Q8IXI1 618 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 COG5Q9UP83 839 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 SPDYE4A6NLX3 237 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 CES2O00748 559 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 CSDE1O75534 798 aaKnown RBP20.55■□□□□ 0.88
BRF1-215ENST00000549655 CALCAP01258 141 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 SURF1Q15526 300 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 FAM187BQ17R55 369 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 SCARA3Q6AZY7 606 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 RGMBQ6NW40 437 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 WDR93Q6P2C0 686 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 IFNLR1Q8IU57 520 aaPredicted RBP20.55■□□□□ 0.88
BRF1-215ENST00000549655 HNRNPLLQ8WVV9 542 aaKnown RBP20.55■□□□□ 0.88
BRF1-215ENST00000549655 MTMR12Q9C0I1 747 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 NUB1Q9Y5A7 615 aa20.55■□□□□ 0.88
BRF1-215ENST00000549655 TARSL2A2RTX5 802 aaKnown RBP20.54■□□□□ 0.88
BRF1-215ENST00000549655 CLSTN1O94985 981 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 CLTAP09496 248 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 OSTNP61366 133 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 DUOXA2Q1HG44 320 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 MARCH8Q5T0T0 291 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 CDT1Q9H211 546 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 ABCB6Q9NP58 842 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 FLRT1Q9NZU1 646 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 CTTNBP2NLQ9P2B4 639 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 AMFRQ9UKV5 643 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 PCDHB2Q9Y5E7 798 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 ZSWIM8A7E2V4 1837 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 KAT6AQ92794 2004 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 DYNC1LI2O43237 492 aaPredicted RBP20.54■□□□□ 0.88
BRF1-215ENST00000549655 CST3P01034 146 aaPredicted RBP20.54■□□□□ 0.88
BRF1-215ENST00000549655 ACO1P21399 889 aaKnown RBP20.54■□□□□ 0.88
BRF1-215ENST00000549655 TBXAS1P24557 533 aaPredicted RBP20.54■□□□□ 0.88
BRF1-215ENST00000549655 IFNL1Q8IU54 200 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 CEP120Q8N960 986 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 PBKQ96KB5 322 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 IMPG2Q9BZV3 1241 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 OGFRQ9NZT2 677 aa20.54■□□□□ 0.88
BRF1-215ENST00000549655 UMODL1Q5DID0 1318 aa20.53■□□□□ 0.88
BRF1-215ENST00000549655 ERLIN1O75477 346 aa20.53■□□□□ 0.88
BRF1-215ENST00000549655 HOXC6P09630 235 aa20.53■□□□□ 0.88
BRF1-215ENST00000549655 HADHBP55084 474 aaKnown RBP20.53■□□□□ 0.88
BRF1-215ENST00000549655 BPIFB4P59827 614 aa20.53■□□□□ 0.88
BRF1-215ENST00000549655 TCEAL1Q15170 157 aa20.53■□□□□ 0.88
BRF1-215ENST00000549655 AMHR2Q16671 573 aa20.53■□□□□ 0.88
BRF1-215ENST00000549655 CCDC70Q6NSX1 233 aa20.53■□□□□ 0.88
BRF1-215ENST00000549655 C17orf99Q6UX52 265 aa20.53■□□□□ 0.88
BRF1-215ENST00000549655 HES6Q96HZ4 224 aa20.53■□□□□ 0.88
BRF1-215ENST00000549655 RBM12Q9NTZ6 932 aaKnown RBP20.53■□□□□ 0.88
BRF1-215ENST00000549655 GPR25O00155 361 aa20.52■□□□□ 0.88
BRF1-215ENST00000549655 RNASE9P60153 205 aaKnown RBP20.52■□□□□ 0.88
BRF1-215ENST00000549655 TFAMQ00059 246 aaKnown RBP20.52■□□□□ 0.88
BRF1-215ENST00000549655 LONRF2Q1L5Z9 754 aa20.52■□□□□ 0.88
BRF1-215ENST00000549655 NLRP7Q8WX94 980 aa20.52■□□□□ 0.88
BRF1-215ENST00000549655 CALR3Q96L12 384 aaKnown RBP20.52■□□□□ 0.88
BRF1-215ENST00000549655 GNEQ9Y223 722 aaKnown RBP20.52■□□□□ 0.88
BRF1-215ENST00000549655 PCDHB4Q9Y5E5 795 aa20.52■□□□□ 0.88
BRF1-215ENST00000549655 ZEB2O60315 1214 aa20.52■□□□□ 0.87
BRF1-215ENST00000549655 ASS1P00966 412 aaKnown RBP20.52■□□□□ 0.87
BRF1-215ENST00000549655 CLEC16AQ2KHT3 1053 aa20.52■□□□□ 0.87
BRF1-215ENST00000549655 ACAD10Q6JQN1 1059 aa20.52■□□□□ 0.87
BRF1-215ENST00000549655 ZNF677Q86XU0 584 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms