RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 KRT18P05783 430 aaKnown RBP17.25■□□□□ 0.35
CHMP1A-206ENST00000549139 STAT6P42226 847 aa17.25■□□□□ 0.35
CHMP1A-206ENST00000549139 AFF1P51825 1210 aaKnown RBP17.25■□□□□ 0.35
CHMP1A-206ENST00000549139 PRPF4BQ13523 1007 aaKnown RBP17.25■□□□□ 0.35
CHMP1A-206ENST00000549139 SLC27A1Q6PCB7 646 aa17.25■□□□□ 0.35
CHMP1A-206ENST00000549139 AGMOQ6ZNB7 445 aa17.25■□□□□ 0.35
CHMP1A-206ENST00000549139 SMG8Q8ND04 991 aaKnown RBP17.25■□□□□ 0.35
CHMP1A-206ENST00000549139 KCNN1Q92952 543 aa17.25■□□□□ 0.35
CHMP1A-206ENST00000549139 MYADMQ96S97 322 aa17.25■□□□□ 0.35
CHMP1A-206ENST00000549139 KIFC3Q9BVG8 833 aa17.25■□□□□ 0.35
CHMP1A-206ENST00000549139 GBP3Q9H0R5 595 aa17.25■□□□□ 0.35
CHMP1A-206ENST00000549139 CA14Q9ULX7 337 aa17.25■□□□□ 0.35
CHMP1A-206ENST00000549139 SPDYE4A6NLX3 237 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 N4BP3O15049 544 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 SLC16A4O15374 487 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 EFEMP2O95967 443 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 SP9P0CG40 484 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 SRFP11831 508 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 ZNF131P52739 623 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 CACNB1Q02641 598 aaPredicted RBP17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 RNASELQ05823 741 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 ADALQ6DHV7 355 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 PHLDB3Q6NSJ2 640 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 CYP26C1Q6V0L0 522 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 PDILTQ8N807 584 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 LEO1Q8WVC0 666 aaPredicted RBP17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 SPATA32Q96LK8 384 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 EIF2AQ9BY44 585 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 SCAND2PQ9GZW5 306 aaPredicted RBP17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 CUEDC2Q9H467 287 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 UBN1Q9NPG3 1134 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 MAN1C1Q9NR34 630 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 MRPL17Q9NRX2 175 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 FAM13BQ9NYF5 915 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 IPPQ9Y573 584 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 CHD6Q8TD26 2715 aa17.24■□□□□ 0.35
CHMP1A-206ENST00000549139 CLUHO75153 1309 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 MTCL1Q9Y4B5 1905 aaKnown RBP17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 CCDC195A0A1B0GUA6 201 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 TTLL13PA6NNM8 815 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 H0YCG3 227 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 STK25O00506 426 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 FAM13AO94988 1023 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 EDN1P05305 212 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 DCNP07585 359 aaKnown RBP17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 ITGA4P13612 1032 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 LIG1P18858 919 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 SCP2P22307 547 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 E2F4Q16254 413 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 NT5DC1Q5TFE4 455 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 RESP18Q5W5W9 173 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 TAS1R3Q7RTX0 852 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 DCLK2Q8N568 766 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 MYCT1Q8N699 235 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 IQUBQ8NA54 791 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 SUMF1Q8NBK3 374 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 TMEM161BQ8NDZ6 487 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 GPR152Q8TDT2 470 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 RUBCNQ92622 972 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 NXPE3Q969Y0 559 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 ZNF707Q96C28 371 aaPredicted RBP17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 TMEM175Q9BSA9 504 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 TRIM6Q9C030 488 aaPredicted RBP17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 PARVGQ9HBI0 331 aa17.23■□□□□ 0.35
CHMP1A-206ENST00000549139 CITO14578 2027 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 MYMKA6NI61 221 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 INPPL1O15357 1258 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 TEX28O15482 410 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 TRAK2O60296 914 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 NPTXRO95502 500 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 SOD2P04179 222 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 ALDH2P05091 517 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 GLULP15104 373 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 GBP2P32456 591 aaPredicted RBP17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 NCKAP1LP55160 1127 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 TMEM132AQ24JP5 1023 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 ATF7IP2Q5U623 682 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 DYMQ7RTS9 669 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 TAS1R1Q7RTX1 841 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 CDR2LQ86X02 465 aaPredicted RBP17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 C1orf210Q8IVY1 113 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 HACE1Q8IYU2 909 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 RNF168Q8IYW5 571 aaPredicted RBP17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 MAML2Q8IZL2 1156 aaPredicted RBP17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 DDX12PQ92771 950 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 STAMQ92783 540 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 CHAMP1Q96JM3 812 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 RPS6KC1Q96S38 1066 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 ADPGKQ9BRR6 497 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 MRPL4Q9BYD3 311 aaKnown RBP17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 LRRC27Q9C0I9 530 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 PDZD7Q9H5P4 517 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 RSAD1Q9HA92 442 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 RXFP1Q9HBX9 757 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 MARCH5Q9NX47 278 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 KANSL3Q9P2N6 904 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 TNFSF13BQ9Y275 285 aa17.22■□□□□ 0.35
CHMP1A-206ENST00000549139 ANHXE9PGG2 379 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 NRP1O14786 923 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 TBCAO75347 108 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms